Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937567.3 | Gene: | robo3 / 100493553 | XenbaseID: | XB-GENE-1032334 | Length: | 1424 | Species: | Xenopus tropicalis |
Alignment Length: | 1493 | Identity: | 448/1493 - (30%) |
---|---|---|---|
Similarity: | 680/1493 - (45%) | Gaps: | 298/1493 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 56 PRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVST--NEKKSHRVQFKDGALFFYRT 118
Fly 119 MQGKKEQ-DGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGI 182
Fly 183 PEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYA 247
Fly 248 KLIVQVKPYFMKEPKDQVMLYGQTATFHCSVGGDPPPKVLWKKEEGNIPVSRARILHDEKSLEIS 312
Fly 313 NITPTDEGTYVCEAHNNVGQISARASLIVHA----PPNFTKRPSNKKVGLNGVVQLPCMASGNPP 373
Fly 374 PSVFWTKEGVSTLMFPN---SSHGRQHVAADGTLQITDVRQEDEGYYVCSAFSVVDSSTVRVFLQ 435
Fly 436 V-SSLDERPPPIIQIGPANQTLPKGSVATLPCRATGNPSPRIKWFHDGHAVQAGN-RYSIIQGSS 498
Fly 499 LRVDDLQLSDSGTYTCTASGERGETSWAATLTVEKPGSTSLHRAADPSTYPAPPGTPKVLNVSRT 563
Fly 564 SISLRWAKSQEKPGAVGPIIGYTVEYFSPDLQTGWIVAAQRVGDTQVTISGLTPGTSYVFLVRAE 628
Fly 629 NTQGISVPSGLSNTIKTIEADFDAASANDLSAARTLLTGK-SVELIDASAINASAVRLEWMLHVS 692
Fly 693 ADEKYVEGLRIHYK-DASVPSAQYHSITVMDASAESFVVGNLKKYTKYEFFLTPFFETIEGQPSN 756
Fly 757 SKTALTYEDVPSAPPDNIQI---GMYNQTAGWVRWTPPPSQHHNGNLYGYKIEVSAGNTMKVLAN 818
Fly 819 MTLNATTTSVLLNNLTTGAVYSVRLNSFTKAGDGPYSKPISLFMDPTHHVHPPRAHPSGTHDGRH 883
Fly 884 EGQDLTYHNNGNIPPGDINPTTHKKTTDYLSGP----------WLMVLVCIVLLVLVISAAISMV 938
Fly 939 YFKRKHQMTKELGHLSV-----------VSDNEITA----LNINSKESLWIDHHRGWRTADTDKD 988
Fly 989 SGLSE---SKLLSHVNSSQSNYNN-----------------SDGGTDYAEVD--TRNLTTFYNCR 1031
Fly 1032 KSPDNPTPYATTMII-----GTSSSETCTKTTSISA----------DKDSGTHSPYSDAFAGQVP 1081
Fly 1082 AVPVVKSNYLQYPVE--PINWSEFLPPPPEHPPPSSTYGYAQGSPESSRKSSKSAGSGISTNQSI 1144
Fly 1145 LNASIHSSSSGGFSAWGVSPQYAVAC---PPENVYSNPLSAVAGGTQNRYQITPTNQ-------- 1198
Fly 1199 -----------HPPQLPAYFATTGPGGAVP----PNHLPFATQR----HAASEYQAGLNAARCAQ 1244
Fly 1245 SRACNS-------------------CDALATPSPMQ----------------------PPPPVPV 1268
Fly 1269 PEGWYQPVHPNSHPMHPTSSNHQIYQCSSECSDHSRSSQS-HKRQLQLEEHGSSAKQRGGHHRR- 1331
Fly 1332 ---RAPVVQPCMESENENMLAEYEQRQYTSDCCNSSREGDTCSCSEGSCLYAEAGEPAPRQMT 1391 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | 53/97 (55%) |
I-set | 56..150 | CDD:254352 | 53/96 (55%) | ||
I-set | 157..251 | CDD:254352 | 42/93 (45%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 40/91 (44%) | ||
I-set | 255..341 | CDD:254352 | 38/85 (45%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 32/68 (47%) | ||
IG_like | 351..436 | CDD:214653 | 36/87 (41%) | ||
Ig | 362..444 | CDD:299845 | 36/85 (42%) | ||
I-set | 445..531 | CDD:254352 | 35/86 (41%) | ||
IGc2 | 459..521 | CDD:197706 | 21/62 (34%) | ||
FN3 | 549..637 | CDD:238020 | 27/87 (31%) | ||
FN3 | 673..762 | CDD:238020 | 22/89 (25%) | ||
fn3 | 770..855 | CDD:278470 | 28/87 (32%) | ||
robo3 | XP_002937567.3 | IgC_1_Robo | 65..163 | CDD:409490 | 53/97 (55%) |
Ig strand B | 82..86 | CDD:409490 | 3/3 (100%) | ||
Ig strand C | 95..99 | CDD:409490 | 2/3 (67%) | ||
Ig strand E | 122..126 | CDD:409490 | 2/3 (67%) | ||
Ig strand F | 141..146 | CDD:409490 | 2/4 (50%) | ||
Ig strand G | 155..158 | CDD:409490 | 2/2 (100%) | ||
Ig | 170..255 | CDD:416386 | 41/92 (45%) | ||
Ig strand A | 170..173 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 175..179 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 183..190 | CDD:409353 | 3/6 (50%) | ||
Ig strand C | 198..203 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 205..208 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 214..218 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 220..226 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 233..241 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 244..255 | CDD:409353 | 5/10 (50%) | ||
Ig | 262..344 | CDD:416386 | 36/82 (44%) | ||
Ig strand A | 262..265 | CDD:409353 | 0/2 (0%) | ||
Ig strand A' | 267..271 | CDD:409353 | 2/3 (67%) | ||
Ig strand B | 274..283 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 289..294 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 297..300 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 303..308 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 309..316 | CDD:409353 | 3/7 (43%) | ||
Ig strand F | 323..331 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 334..344 | CDD:409353 | 4/9 (44%) | ||
Ig | 353..449 | CDD:416386 | 38/95 (40%) | ||
Ig strand A | 353..357 | CDD:409353 | 0/3 (0%) | ||
Ig strand A' | 359..363 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 369..377 | CDD:409353 | 2/7 (29%) | ||
Ig strand C | 380..387 | CDD:409353 | 5/6 (83%) | ||
Ig strand C' | 389..392 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 405..410 | CDD:409353 | 2/4 (50%) | ||
Ig strand E | 412..419 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 425..434 | CDD:409353 | 5/8 (63%) | ||
Ig strand G | 436..447 | CDD:409353 | 2/10 (20%) | ||
Ig | 457..543 | CDD:416386 | 34/85 (40%) | ||
Ig strand A | 457..460 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 464..467 | CDD:409353 | 2/2 (100%) | ||
Ig strand B | 473..480 | CDD:409353 | 1/6 (17%) | ||
Ig strand C | 486..491 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 493..495 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 502..506 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 509..514 | CDD:409353 | 1/4 (25%) | ||
Ig strand F | 522..530 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 533..543 | CDD:409353 | 4/9 (44%) | ||
FN3 | 561..655 | CDD:238020 | 30/95 (32%) | ||
FN3 | 687..766 | CDD:238020 | 22/84 (26%) | ||
fn3 | 774..861 | CDD:394996 | 28/87 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 103 | 1.000 | Domainoid score | I6691 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 602 | 1.000 | Inparanoid score | I932 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D173520at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9461 | |
Panther | 1 | 1.100 | - | - | O | PTHR12231 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.160 |