Sequence 1: | NP_476899.1 | Gene: | robo1 / 37603 | FlyBaseID: | FBgn0005631 | Length: | 1395 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937566.3 | Gene: | robo4 / 100493397 | XenbaseID: | XB-GENE-955396 | Length: | 1166 | Species: | Xenopus tropicalis |
Alignment Length: | 1514 | Identity: | 328/1514 - (21%) |
---|---|---|---|
Similarity: | 481/1514 - (31%) | Gaps: | 605/1514 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 PMHPENHAIARSTSTTNNPSRSRSSRMWLLPAWLLLVLVASNGLPAVRGQYQSPRIIEHPTDLVV 67
Fly 68 KKNEPATLNCKVEGKPEPTIEWFKDGEPVSTN-EKKSHR--VQFKDGALFFYRTMQGKKEQDGGE 129
Fly 130 YWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGV 194
Fly 195 PLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKPYFMK 259
Fly 260 EPKDQVMLYGQTATFHCSVGGDPPPKVLWKKEEGNIPVSRARILHDEKSLEISNITPTDEGTYVC 324
Fly 325 EAHNNVGQISARASLIVHAPPNFTKRPSNKKVGLNGVVQLPCMASGNPPPSVFWTKEGVSTLMFP 389
Fly 390 NSSHGRQHVAADGTLQITDVRQEDEGYYVCSAFSVVDSSTVRVFLQVSSLDERPPPIIQIGPANQ 454
Fly 455 TLPKGSVATLPCRATGNPSPRIKWFHDGHAVQAGNRYSIIQGSSLRVDDLQLSDSGTYTCTASGE 519
Fly 520 RGETSWAATLTVEKPGSTSLHRAADPSTYPAPPGTPKVLNVSRTSISLRWAKSQEKPGAVGPIIG 584
Fly 585 YTVEYFSPDLQTGWIVAAQRVGDTQVTISGLTPGTSYVFLVRAENTQGISVPSGLSNTIKTIEAD 649
Fly 650 FDAASANDLSAARTLLTGKSVELIDASAINASAVRLEWMLHVSADEKYVEGLRIHYKDASVPSAQ 714
Fly 715 YHSITVMDASAESFVVGNLKKYTKYEFFLTPFFETIEGQPSNSKTALTYEDVPSAPPDNIQIGMY 779
Fly 780 NQTAGW--VRWTPPPSQHHNGNLYGYKIEVSAGNTMKVLANMTLNATTTSVLLNNLTTGAVYSVR 842
Fly 843 LNSFTKAGDGPYSKPISLFMDPTHHVHPPRAHPSGTHDGRHEGQDLTYHNNGNIPPGDINPTTHK 907
Fly 908 KTTDYLSGPWLMVLVCIVLLVLVISAAISMVYFKRKHQMTKE---LGH--LSVVSDNEITALNIN 967
Fly 968 SKESLWIDHHRGWRTA----------------------DT----------DKDSGLSESKLLSHV 1000
Fly 1001 NSSQSNYNNSDGGTDYAEVDTRNLTTFYNCR-----------KSPD-------NPTPY------- 1040
Fly 1041 ATTMIIGTSS--------------------SETCTKTTSISADKDSGTHSPYSDA--FAGQVPAV 1083
Fly 1084 ------PVVKSNY------------LQYP-----VEPINWSEFLPPPPEHPPPSSTYGYAQGSPE 1125
Fly 1126 SSRKSSKSAGSGIST----NQSILNASIHSSSSGGFSAWGVSPQYAVACPPENVYSNPLSAVAGG 1186
Fly 1187 TQNRYQITPTNQH------PPQLPAYFATTGPGGAVPPNHLPFATQRHAASEYQAGLNAARCAQS 1245
Fly 1246 RACNSCDALATPSPMQPPPPVPVPEGWYQPVHPNSHPMHPTSSNHQIYQCSSECSDHSRSSQSHK 1310
Fly 1311 RQLQLEEHGSSAKQRGGHHRRRAPVVQPCMESENENMLA--------EYEQRQYTSDCCNSSREG 1367
Fly 1368 DTCSCSEGSCL----YAEA 1382 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo1 | NP_476899.1 | Ig | 56..151 | CDD:299845 | 53/97 (55%) |
I-set | 56..150 | CDD:254352 | 53/96 (55%) | ||
I-set | 157..251 | CDD:254352 | 40/93 (43%) | ||
Ig2_Robo | 159..251 | CDD:143201 | 38/91 (42%) | ||
I-set | 255..341 | CDD:254352 | 16/85 (19%) | ||
Ig3_Robo | 272..341 | CDD:143202 | 10/68 (15%) | ||
IG_like | 351..436 | CDD:214653 | 0/84 (0%) | ||
Ig | 362..444 | CDD:299845 | 0/81 (0%) | ||
I-set | 445..531 | CDD:254352 | 19/85 (22%) | ||
IGc2 | 459..521 | CDD:197706 | 14/61 (23%) | ||
FN3 | 549..637 | CDD:238020 | 4/87 (5%) | ||
FN3 | 673..762 | CDD:238020 | 22/88 (25%) | ||
fn3 | 770..855 | CDD:278470 | 25/86 (29%) | ||
robo4 | XP_002937566.3 | Ig | 70..168 | CDD:416386 | 53/97 (55%) |
Ig strand A | 70..74 | CDD:409353 | 3/3 (100%) | ||
Ig strand A' | 77..82 | CDD:409353 | 2/4 (50%) | ||
Ig strand B | 86..94 | CDD:409353 | 5/7 (71%) | ||
Ig strand C | 100..105 | CDD:409353 | 4/4 (100%) | ||
Ig strand C' | 108..110 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 121..125 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 128..134 | CDD:409353 | 4/5 (80%) | ||
Ig strand F | 145..153 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 156..168 | CDD:409353 | 7/11 (64%) | ||
Ig | 175..260 | CDD:416386 | 39/92 (42%) | ||
Ig strand A | 175..178 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 180..184 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 188..195 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 203..208 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 210..213 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 219..222 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 225..231 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 238..246 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 249..260 | CDD:409353 | 6/10 (60%) | ||
Ig | 269..349 | CDD:416386 | 33/270 (12%) | ||
Ig strand A' | 272..276 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 279..288 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 294..299 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 302..305 | CDD:409353 | 1/163 (1%) | ||
Ig strand D | 308..313 | CDD:409353 | 3/4 (75%) | ||
Ig strand E | 314..321 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 328..336 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 339..349 | CDD:409353 | 3/9 (33%) | ||
FN3 | 377..462 | CDD:238020 | 22/86 (26%) | ||
fn3 | 471..557 | CDD:394996 | 25/86 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I8278 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |