DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ppa and AT5G52480

DIOPT Version :9

Sequence 1:	NP_001261138.1	Gene:	Ppa / 37602	FlyBaseID:	FBgn0020257	Length:	562	Species:	Drosophila melanogaster
Sequence 2:	NP_200061.3	Gene:	AT5G52480 / 835324	AraportID:	AT5G52480	Length:	241	Species:	Arabidopsis thaliana

Alignment Length:	161	Identity:	39/161 - (24%)
Similarity:	76/161 - (47%)	Gaps:	37/161 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   360 SDEALGHIAQGLTSLKSINLSFCVSVTDSG-LKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGS 423
            ||..|.:||:..::|:|:.| .|..:||.| ::.:.::|.||:|.:                  |
plant    40 SDSLLTYIAERSSNLRSLRL-MCSEITDDGFVQAVVKLPMLEELEV------------------S 85

  Fly   424 GINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQ-----CQITDHGMLKIAKALHELENLNIGQ 483
            ||:         :|.:::.........|::|.||:     ....||..:.||:::.:|.:|.:
plant    86 GIS---------LSGESMKLAGLSCPNLKTLMLNRLFYLSSDDDDHDAIAIAESMPKLRHLQL-- 139

  Fly   484 C-SRITDKGLQTLAEDLTNLKTIDLYGCTQL 513
            | :::|..||..:.:...:|:.:||..|..|
plant   140 CGNKLTKTGLNAILDGCPHLEHLDLRQCINL 170

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689
		AMN1	<226..>334	CDD:187754
		leucine-rich repeat	236..256	CDD:275381
		leucine-rich repeat	263..288	CDD:275381
		leucine-rich repeat	289..314	CDD:275381
		leucine-rich repeat	315..347	CDD:275381
		AMN1	347..524	CDD:187754	39/161 (24%)
		leucine-rich repeat	348..373	CDD:275381	5/12 (42%)
		leucine-rich repeat	374..398	CDD:275381	7/24 (29%)
		leucine-rich repeat	399..424	CDD:275381	3/24 (13%)
		leucine-rich repeat	425..450	CDD:275381	2/24 (8%)
		leucine-rich repeat	451..475	CDD:275381	8/28 (29%)
		leucine-rich repeat	476..501	CDD:275381	6/25 (24%)
AT5G52480	NP_200061.3	AMN1	<40..167	CDD:187754	37/156 (24%)
		leucine-rich repeat	54..78	CDD:275381	7/24 (29%)
		leucine-rich repeat	79..103	CDD:275381	7/50 (14%)
		leucine-rich repeat	134..158	CDD:275381	6/25 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810