DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ppa and AT4G30640

DIOPT Version :9

Sequence 1:	NP_001261138.1	Gene:	Ppa / 37602	FlyBaseID:	FBgn0020257	Length:	562	Species:	Drosophila melanogaster
Sequence 2:	NP_567849.1	Gene:	AT4G30640 / 829187	AraportID:	AT4G30640	Length:	301	Species:	Arabidopsis thaliana

Alignment Length:	280	Identity:	70/280 - (25%)
Similarity:	114/280 - (40%)	Gaps:	44/280 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly   150 SNLFP-------ELLEQIFEHL--PVRDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKRSSPSL 205
            |.|:|       |.|..||..|  ..|.:| ...|...|.:|.|..::....:.:... .|.|..
plant    14 SGLYPDWSELTRECLLDIFSRLSQEQRWIG-PMLVSKNWMNACYDPTLNTIFDLETRF-LSFPES 76

  Fly   206 FNCLVKRGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSL 270
            .|........||.  |..||:.|...|  .||.:.:..|   .:.:|.:| :...|||:.|.:..
plant    77 INWWTPEFEDKVD--SFLRSVVDRSEG--GLTEIRIRHC---TERSLSYA-AERCPNLEVLWIKN 133

  Fly   271 CKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQ------ 329
            |..:||.|:.:||.:..||..|::.....||:..|:.:....:.||.|.......:...
plant   134 CPNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVA 198

  Fly   330 GIGHLAGFSRETAEGNLQLEYLGLQDCQ---------RLSDEALGHIAQGLTSLKSINLSFCVSV 385
            .:.:||.|.|   .||::...:|....|         .|:...|..:.:|.::|:.::|..|:|:
plant   199 PLDYLATFPR---YGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCISL 260

  Fly   386 T-------DSGLKHLARMPK 398
            |       .||||:|..:.|
plant   261 TRSDINTNTSGLKNLTEIIK 280

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689	14/48 (29%)
		AMN1	<226..>334	CDD:187754	26/113 (23%)
		leucine-rich repeat	236..256	CDD:275381	4/19 (21%)
		leucine-rich repeat	263..288	CDD:275381	8/24 (33%)
		leucine-rich repeat	289..314	CDD:275381	5/24 (21%)
		leucine-rich repeat	315..347	CDD:275381	9/37 (24%)
		AMN1	347..524	CDD:187754	16/68 (24%)
		leucine-rich repeat	348..373	CDD:275381	5/33 (15%)
		leucine-rich repeat	374..398	CDD:275381	10/30 (33%)
		leucine-rich repeat	399..424	CDD:275381	70/280 (25%)
		leucine-rich repeat	425..450	CDD:275381
		leucine-rich repeat	451..475	CDD:275381
		leucine-rich repeat	476..501	CDD:275381
AT4G30640	NP_567849.1	AMN1	<101..>179	CDD:187754	22/83 (27%)
		leucine-rich repeat	103..125	CDD:275381	5/25 (20%)
		leucine-rich repeat	126..151	CDD:275381	8/24 (33%)
		leucine-rich repeat	152..177	CDD:275381	5/24 (21%)
		leucine-rich repeat	178..223	CDD:275381	10/47 (21%)
		leucine-rich repeat	224..248	CDD:275381	3/23 (13%)
		leucine-rich repeat	249..274	CDD:275381	8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810