DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ppa and AT4G11580

DIOPT Version :9

Sequence 1:	NP_001261138.1	Gene:	Ppa / 37602	FlyBaseID:	FBgn0020257	Length:	562	Species:	Drosophila melanogaster
Sequence 2:	NP_192895.1	Gene:	AT4G11580 / 826762	AraportID:	AT4G11580	Length:	333	Species:	Arabidopsis thaliana

Alignment Length:	338	Identity:	80/338 - (23%)
Similarity:	132/338 - (39%)	Gaps:	98/338 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly   150 SNLFPELLEQIFEHLPVRDLGR-AAQVCTAWRDAAYAKSVWKGVE----AKLHLKRSSPSLFNCL 209
            ::|..::||.||..|.|.|:.. |::||.:|..|::.|::|..|:    .:|.:.|    :||..
plant    15 ADLNKDILELIFNKLDVMDITMGASRVCISWFLASHNKTLWNTVDLTNLQELDVSR----IFNFK 75

  Fly   210 --------------VKRGIKKVQILSLRR------------SLKDLVLGVPALTSL---NLSGCF 245
                          .|.|:..:....:.|            ||.:|::.:..|:.:   ||...|
plant    76 DKERPIFFYKHPVDHKHGLTNLLTKIISRFFLDFFEVEGSISLMNLLVEISKLSRMAPKNLFFNF 140

  Fly   246 NVADMNLGHAFSVD-LPNLKTLDLSL-CKQITDTSLGRIAQHLRNLETLELG------------- 295
            |......|..|:.: :||::.|.|.: |.| .:.||.......:||:||.:.
plant   141 NSYIQENGLKFAAEKMPNIEKLALPIWCYQ-NEKSLRFAFSQWKNLKTLIIAHEHSFSGRFDFKA 204

  Fly   296 ---GCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGF-SRETAEGNLQLEYLGLQDC 356
               .|.|:||            ||:|             |.|..: |||.......|:.|.|: |
plant   205 VGESCSNLTN------------LKYL-------------GRLEEYTSREIVSYLHSLKRLSLR-C 243

  Fly   357 QRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL---KHL------ARMPKLEQL-----NLRSC 407
            ..:|..|:.....||.:|..:|:|.|.:..|..|   |.:      |...|||:.     :...|
plant   244 FLVSSIAVYRFITGLPNLTILNVSHCKNPYDYFLPIAKSIDNYVITAATQKLEKFITCPHDCMIC 308

  Fly   408 DNISDIGMAYLTE 420
            .:.....::||.|
plant   309 KDRCRYSLSYLAE 321

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689	14/40 (35%)
		AMN1	<226..>334	CDD:187754	29/128 (23%)
		leucine-rich repeat	236..256	CDD:275381	6/22 (27%)
		leucine-rich repeat	263..288	CDD:275381	6/25 (24%)
		leucine-rich repeat	289..314	CDD:275381	7/40 (18%)
		leucine-rich repeat	315..347	CDD:275381	8/32 (25%)
		AMN1	347..524	CDD:187754	23/88 (26%)
		leucine-rich repeat	348..373	CDD:275381	8/24 (33%)
		leucine-rich repeat	374..398	CDD:275381	8/32 (25%)
		leucine-rich repeat	399..424	CDD:275381	6/27 (22%)
		leucine-rich repeat	425..450	CDD:275381
		leucine-rich repeat	451..475	CDD:275381
		leucine-rich repeat	476..501	CDD:275381
AT4G11580	NP_192895.1	leucine-rich repeat	159..184	CDD:275381	6/25 (24%)
		leucine-rich repeat	185..211	CDD:275381	4/25 (16%)
		leucine-rich repeat	212..235	CDD:275381	10/47 (21%)
		leucine-rich repeat	236..260	CDD:275381	8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810