Protein Alignment Ppa and SKP2

DIOPT Version :9

• Sequence 1: NP_001261138.1
• Gene: Ppa / 37602
• FlyBaseID: FBgn0020257
• Length: 562
• Species: Drosophila melanogaster
• Sequence 2: NP_005974.2
• Gene: SKP2 / 6502
• HGNCID: 10901
• Length: 424
• Species: Homo sapiens
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689
		AMN1	<226..>334	CDD:187754
		leucine-rich repeat	236..256	CDD:275381
		leucine-rich repeat	263..288	CDD:275381
		leucine-rich repeat	289..314	CDD:275381
		leucine-rich repeat	315..347	CDD:275381
		AMN1	347..524	CDD:187754
		leucine-rich repeat	348..373	CDD:275381
		leucine-rich repeat	374..398	CDD:275381
		leucine-rich repeat	399..424	CDD:275381
		leucine-rich repeat	425..450	CDD:275381
		leucine-rich repeat	451..475	CDD:275381
		leucine-rich repeat	476..501	CDD:275381
SKP2	NP_005974.2	Mediates interaction with hepatitis C virus non-structural protein NS5A. /evidence=ECO:0000269|PubMed:27194766	1..220
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	39..73
		Nuclear localization signal. /evidence=ECO:0000269|PubMed:22770219	67..73
		F-box-like	97..141	CDD:403981
		leucine-rich repeat	183..207	CDD:275381
		AMN1	193..>345	CDD:187754
		leucine-rich repeat	208..231	CDD:275381
		LRR 3. /evidence=ECO:0000269|PubMed:11099048	210..234
		leucine-rich repeat	232..257	CDD:275381
		LRR 4. /evidence=ECO:0000269|PubMed:11099048	235..257
		leucine-rich repeat	258..284	CDD:275381
		LRR 5. /evidence=ECO:0000269|PubMed:11099048	258..284
		leucine-rich repeat	285..311	CDD:275381
		LRR 6. /evidence=ECO:0000269|PubMed:11099048	286..308
		LRR 7. /evidence=ECO:0000269|PubMed:11099048	309..330
		leucine-rich repeat	312..336	CDD:275381
		LRR 8. /evidence=ECO:0000269|PubMed:11099048	334..356
		leucine-rich repeat	337..356	CDD:275381
		LRR 9. /evidence=ECO:0000269|PubMed:11099048	359..378
		leucine-rich repeat	365..392	CDD:275381
		LRR 10. /evidence=ECO:0000269|PubMed:11099048	380..401
		Mediates interaction with IFI27. /evidence=ECO:0000269|PubMed:27194766	402..424

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910