DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppa and FBXL17

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_005272105.1 Gene:FBXL17 / 64839 HGNCID:13615 Length:712 Species:Homo sapiens


Alignment Length:501 Identity:125/501 - (24%)
Similarity:214/501 - (42%) Gaps:71/501 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 CGGSGSNGAATSGGAAIGGAGAGGAPSWAMDE-LYQQTELPGLTRTGATTTHHHLLRFTPYALHH 88
            |||.|..|....||.. |.||.|.:|....|. ..|..|.|                  |..|..
Human   215 CGGGGCGGGGGGGGGG-GPAGGGASPPRPPDAGCCQAPEQP------------------PQPLCP 260

  Fly    89 RPPHHQLQTLPPALYLQHAAAAAAAAAAAAAHAQHHHH----HHHHLPHRPASPESPPPVEGTHI 149
            .|.....:..|    .:....|..|...|...||..|.    .....|..|......||.|...|
Human   261 PPSSPTSEGAP----TEAGGDAVRAGGTAPLSAQQQHECGDADCRESPENPCDCHREPPPETPDI 321

  Fly   150 SNLFPELLEQIFEHLPV--RDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKRSSPSLFNCLVKR 212
            :.|.|.:|.:||.:|.:  |.|. |:.||..|||.......||.::                   
Human   322 NQLPPSILLKIFSNLSLDERCLS-ASLVCKYWRDLCLDFQFWKQLD------------------- 366

  Fly   213 GIKKVQILSLRRSLKDLVLGVPA-----LTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCK 272
                   ||.|:.:.|.:|...|     :..:|:|.|.:::| |.....:...|.|.......||
Human   367 -------LSSRQQVTDELLEKIASRSQNIIEINISDCRSMSD-NGVCVLAFKCPGLLRYTAYRCK 423

  Fly   273 QITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGF 337
            |::|||:..:|.|...|:.:.:|....:|:.||..:....::||.::...|:.|||:|:..:   
Human   424 QLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVI--- 485

  Fly   338 SRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQL 402
                |:|.|:|:.:.:|:.:.::|:::...|:....|:.:....| |||..|:.||.::..|..|
Human   486 ----AKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC-SVTSKGVIHLTKLRNLSSL 545

  Fly   403 NLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGML 467
            :||....:.:..:..:.:....::||::.....|:|:.:..||:....|:.|.|..|:|||:.::
Human   546 DLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDYALI 610

  Fly   468 KIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQL 513
            .|.:....:|.:::|.|..|||:|...:|:...:|:.:.|..|.::
Human   611 AIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKV 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 15/42 (36%)
AMN1 <226..>334 CDD:187754 30/112 (27%)
leucine-rich repeat 236..256 CDD:275381 5/19 (26%)
leucine-rich repeat 263..288 CDD:275381 9/24 (38%)
leucine-rich repeat 289..314 CDD:275381 5/24 (21%)
leucine-rich repeat 315..347 CDD:275381 9/31 (29%)
AMN1 347..524 CDD:187754 41/167 (25%)
leucine-rich repeat 348..373 CDD:275381 4/24 (17%)
leucine-rich repeat 374..398 CDD:275381 8/23 (35%)
leucine-rich repeat 399..424 CDD:275381 4/24 (17%)
leucine-rich repeat 425..450 CDD:275381 6/24 (25%)
leucine-rich repeat 451..475 CDD:275381 8/23 (35%)
leucine-rich repeat 476..501 CDD:275381 8/24 (33%)
FBXL17XP_005272105.1 F-box-like 321..368 CDD:289689 17/73 (23%)
leucine-rich repeat 362..387 CDD:275381 8/50 (16%)
leucine-rich repeat 388..413 CDD:275381 5/25 (20%)
AMN1 411..573 CDD:187754 43/169 (25%)
leucine-rich repeat 414..439 CDD:275381 9/24 (38%)
leucine-rich repeat 440..465 CDD:275381 5/24 (21%)
leucine-rich repeat 466..491 CDD:275381 9/31 (29%)
leucine-rich repeat 492..517 CDD:275381 4/24 (17%)
leucine-rich repeat 518..541 CDD:275381 8/23 (35%)
leucine-rich repeat 542..567 CDD:275381 4/24 (17%)
AMN1 547..>652 CDD:187754 26/104 (25%)
leucine-rich repeat 568..593 CDD:275381 6/24 (25%)
leucine-rich repeat 594..615 CDD:275381 8/20 (40%)
leucine-rich repeat 619..641 CDD:275381 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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