Sequence 1: | NP_001261138.1 | Gene: | Ppa / 37602 | FlyBaseID: | FBgn0020257 | Length: | 562 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011123.1 | Gene: | fbxl15 / 496536 | XenbaseID: | XB-GENE-973058 | Length: | 292 | Species: | Xenopus tropicalis |
Alignment Length: | 304 | Identity: | 69/304 - (22%) |
---|---|---|---|
Similarity: | 130/304 - (42%) | Gaps: | 81/304 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 249 DMNLGHAFSVD-----LPNLKTLDLSLCKQITDTSLG------RIAQHLRN---LETLELGGCCN 299
Fly 300 -ITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEA 363
Fly 364 LGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSL 428
Fly 429 DVSFCDKISDQALTHIAQGLYRLRSLSLN-QCQITDHGMLKIAKALHELENLNIGQCSRITDKGL 492
Fly 493 QTLAEDLTNLKTIDLYGCTQLSSKGI------DIIMKL-PKLQK 529 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ppa | NP_001261138.1 | F-box-like | 149..190 | CDD:289689 | |
AMN1 | <226..>334 | CDD:187754 | 28/99 (28%) | ||
leucine-rich repeat | 236..256 | CDD:275381 | 2/6 (33%) | ||
leucine-rich repeat | 263..288 | CDD:275381 | 8/30 (27%) | ||
leucine-rich repeat | 289..314 | CDD:275381 | 8/25 (32%) | ||
leucine-rich repeat | 315..347 | CDD:275381 | 7/31 (23%) | ||
AMN1 | 347..524 | CDD:187754 | 38/183 (21%) | ||
leucine-rich repeat | 348..373 | CDD:275381 | 0/24 (0%) | ||
leucine-rich repeat | 374..398 | CDD:275381 | 5/23 (22%) | ||
leucine-rich repeat | 399..424 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 425..450 | CDD:275381 | 4/24 (17%) | ||
leucine-rich repeat | 451..475 | CDD:275381 | 9/24 (38%) | ||
leucine-rich repeat | 476..501 | CDD:275381 | 9/24 (38%) | ||
fbxl15 | NP_001011123.1 | leucine-rich repeat | 47..81 | CDD:275381 | 10/33 (30%) |
AMN1 | 65..251 | CDD:187754 | 56/243 (23%) | ||
leucine-rich repeat | 82..108 | CDD:275381 | 8/25 (32%) | ||
leucine-rich repeat | 109..134 | CDD:275381 | 13/82 (16%) | ||
LRR 1 | 134..155 | 3/20 (15%) | |||
leucine-rich repeat | 135..160 | CDD:275381 | 4/24 (17%) | ||
LRR 2 | 160..181 | 3/20 (15%) | |||
leucine-rich repeat | 161..186 | CDD:275381 | 4/24 (17%) | ||
LRR 3 | 186..207 | 8/20 (40%) | |||
leucine-rich repeat | 187..212 | CDD:275381 | 9/24 (38%) | ||
LRR 4 | 212..233 | 6/20 (30%) | |||
leucine-rich repeat | 213..238 | CDD:275381 | 9/24 (38%) | ||
LRR 5 | 238..259 | 3/20 (15%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |