Protein Alignment Ppa and CG4911

DIOPT Version :9

• Sequence 1: NP_001261138.1
• Gene: Ppa / 37602
• FlyBaseID: FBgn0020257
• Length: 562
• Species: Drosophila melanogaster
• Sequence 2: NP_001286990.1
• Gene: CG4911 / 39043
• FlyBaseID: FBgn0035959
• Length: 450
• Species: Drosophila melanogaster
• Alignment Length: 437
• Identity: 80/437 - (18%)
• Similarity: 150/437 - (34%)
• Gaps: 149/437 - (34%)

  Fly   157 LEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHL---------KRSSPSLFNCLV-- 210
            |..||::|..:|...||.||.:||.|.:.|..::....:|.:         .||..:|...|:
  Fly    18 LNHIFDYLNPQDRRSAAGVCFSWRHALFQKRYFRNFRFQLDVGCDDQLAFFHRSMANLAMELIVV 82

  Fly   211 -----------KRG-IKKV----QILSLRRSLKDLVLGVPALTSLN------LSGCF-------- 245
                       .|| :.||    .|..||....:  :|:.|:.:::      :..||
  Fly    83 FDFQNAVHIQKMRGLLYKVAHCDNIQKLRFQTHN--VGLVAIGNMHSEHLLAIEQCFVEPLILFL 145

  Fly   246 -------NVADMN-------LGHAF-----------SVDLPNLK---------TLDLSLCK---- 272
                   .:.|:.       .||.|           .:.|.::|         :||.:|.:
  Fly   146 SRKRQPCQLLDLGAIEALSYYGHDFLKAMGKPQELLQLTLASIKYDPSHYPILSLDSTLLQKCAA 210

  Fly   273 -QITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNL-RSCW-----HISD-- 328
             |:.......::..|  |.|:::     :....||:...||...:|.:: .:.|     |.|.
  Fly   211 LQVLSLDYDTLSDEL--LHTIQV-----LPLRKLLIAVHGLDSEEHPDVSETAWSNFSDHFSSIE 268

  Fly   329 ------QGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALG----HIAQGLTSLKSINLSFCV 383
                  .....:|.........|:.:.::.|..|::::.|||.    |..:.|.|:..:
  Fly   269 LVLTLVYAYEAIALLQHRVLRSNMPVTHVRLLFCEKMNAEALDWMSLHYRETLRSIHYV------ 327

  Fly   384 SVTDSGLKHLARMPKLEQLNLRS---------CDNISDIGM-AYLTEGGSGINSLDVSFCDKISD 438
               |:..|:..||....:::|..         |..:.:|.: .||.:
  Fly   328 ---DAPYKYSNRMNSSRRVSLLQDPFVMMAWRCKQLEEIVVHGYLMD------------------ 371

  Fly   439 QALTHIAQGLYRLRSLSLNQCQIT--DHGMLKIAKALHELENLNIGQ 483
               .|...|:.|||...|.:.:::  |.....:..|.:|..:..:||
  Fly   372 ---PHNLVGIARLRGRQLKRLEVSMIDWSGAPLLNAYNEEISTLLGQ 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689	13/32 (41%)
		AMN1	<226..>334	CDD:187754	25/174 (14%)
		leucine-rich repeat	236..256	CDD:275381	5/47 (11%)
		leucine-rich repeat	263..288	CDD:275381	6/38 (16%)
		leucine-rich repeat	289..314	CDD:275381	6/24 (25%)
		leucine-rich repeat	315..347	CDD:275381	6/45 (13%)
		AMN1	347..524	CDD:187754	28/153 (18%)
		leucine-rich repeat	348..373	CDD:275381	7/28 (25%)
		leucine-rich repeat	374..398	CDD:275381	4/23 (17%)
		leucine-rich repeat	399..424	CDD:275381	5/34 (15%)
		leucine-rich repeat	425..450	CDD:275381	2/24 (8%)
		leucine-rich repeat	451..475	CDD:275381	5/25 (20%)
		leucine-rich repeat	476..501	CDD:275381	2/8 (25%)
CG4911	NP_001286990.1	F-box	8..53	CDD:279040	13/34 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910