DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppa and fbxl5

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001288257.1 Gene:fbxl5 / 322181 ZFINID:ZDB-GENE-030131-900 Length:679 Species:Danio rerio


Alignment Length:590 Identity:123/590 - (20%)
Similarity:196/590 - (33%) Gaps:218/590 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HHQLQTLPPALYLQHAAAAAAAAAAAA----------AHAQHHHHHHHHLPHRPASPESPPPVEG 146
            :.:|:.:...:.|||.::...::.:..          :||:......:. .|.....|.  .:|.
Zfish   144 YEELKAIKQQVMLQHCSSQCQSSCSDTHTLLKGLSLWSHAELQKAFKYS-DHEKTGEER--VLER 205

  Fly   147 THISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWK--------------GVEAKLH 197
            ..:|:|..|||.:||..|..:||.|.||||:.|.......|:|:              |....|.
Zfish   206 VSVSSLPQELLLRIFRFLGPQDLCRCAQVCSVWTQVTRTGSLWRHLYPVRWARGEYYSGPPGDLD 270

  Fly   198 LKRSSPSLFNCLVKRGIKKVQ---------------------------ILSLRRSLKDLVLGV-- 233
            |:....         .||.:|                           |.:|:|. |.|:.|:  
Zfish   271 LEPDDD---------WIKSLQDDGRAYQEWDEDADVDESEEASAERSSISALQRE-KLLLNGIIQ 325

  Fly   234 ---PALTSLNLSGCFNVADMNLGHAFSVD----------LPNLKTLDLSLCKQITDTS------- 278
               ||:.|       :|..::|.::.::.          .|||..|||:.    ||.|       
Zfish   326 KLLPAVGS-------SVRSLSLAYSSTLSSKMVRQMLSLCPNLTHLDLTQ----TDVSDSAFDSW 379

  Fly   279 --LGRIAQHLRNLETLELGGCCNITNTGLLLIAWGL------------------------KKLKH 317
              ||...    .|:.|:|.||..||:..|.:::.||                        .:|:.
Zfish   380 CALGACG----TLQHLDLSGCDKITDRTLKILSVGLGDSSTPSPAHKLLQAPPSPIRIEEPRLQP 440

  Fly   318 LNLRSCWHI----------SDQGIGHL--------------AGFSRETAEGNLQLEYLGLQD--- 355
            :. |||..:          |..|..|:              |.:||.....:.::...|:.:   
Zfish   441 MG-RSCQDLIFKRRPGGRGSGCGPTHIWVLDPVKLADIEDAADWSRRGGVASQEIGCGGISEALS 504

  Fly   356 ----CQR----------------LSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLE 400
                |:|                ..|...||             |.|.|...:.|:        .
Zfish   505 ASCCCRRSQRRGFRTGLSSSPWQYGDALCGH-------------SSCCSSDAAALR--------T 548

  Fly   401 QLNLRSCDNISDIGMAYLTEGGSGINSLDVSFC---DKISDQALTHIAQGLYR-LRSLSLNQC-Q 460
            |.:|::....:::......||.|         |   ...:||:      |..| ||.|||:.| |
Zfish   549 QSDLQATGGSAELRTKCWFEGQS---------CAEHHNRTDQS------GAQRALRFLSLSGCHQ 598

  Fly   461 ITDHGM--LKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMK 523
            |||.|:  :.:...|..||:||:..|..||..|||.:......|.....|.|..::....|....
Zfish   599 ITDLGLRCVCLRGGLPLLEHLNLSGCPLITGAGLQEVVSASPALNIEHFYYCDNINGPHADTASG 663

  Fly   524 LPKLQ 528
            ...||
Zfish   664 CQNLQ 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 17/40 (43%)
AMN1 <226..>334 CDD:187754 35/165 (21%)
leucine-rich repeat 236..256 CDD:275381 3/19 (16%)
leucine-rich repeat 263..288 CDD:275381 9/33 (27%)
leucine-rich repeat 289..314 CDD:275381 10/48 (21%)
leucine-rich repeat 315..347 CDD:275381 10/55 (18%)
AMN1 347..524 CDD:187754 46/206 (22%)
leucine-rich repeat 348..373 CDD:275381 6/47 (13%)
leucine-rich repeat 374..398 CDD:275381 4/23 (17%)
leucine-rich repeat 399..424 CDD:275381 4/24 (17%)
leucine-rich repeat 425..450 CDD:275381 4/27 (15%)
leucine-rich repeat 451..475 CDD:275381 12/26 (46%)
leucine-rich repeat 476..501 CDD:275381 10/24 (42%)
fbxl5NP_001288257.1 Hemerythrin-like. /evidence=ECO:0000250 1..159 3/14 (21%)
Hr_FBXL5 7..155 CDD:213984 1/10 (10%)
F-box-like 208..252 CDD:289689 18/43 (42%)
AMN1 313..>410 CDD:187754 29/112 (26%)
LRR 1 316..342 8/33 (24%)
leucine-rich repeat 335..360 CDD:275381 2/24 (8%)
LRR 2 343..367 5/23 (22%)
leucine-rich repeat 361..387 CDD:275381 9/33 (27%)
LRR 3 368..395 8/34 (24%)
leucine-rich repeat 388..422 CDD:275381 10/33 (30%)
LRR 4 396..426 6/29 (21%)
leucine-rich repeat 423..447 CDD:275381 4/24 (17%)
leucine-rich repeat 510..574 CDD:275381 14/93 (15%)
LRR 5 565..595 13/44 (30%)
AMN1 566..>644 CDD:187754 31/92 (34%)
leucine-rich repeat 588..615 CDD:275381 12/26 (46%)
LRR 6 596..623 11/26 (42%)
leucine-rich repeat 616..641 CDD:275381 10/24 (42%)
LRR 7 624..649 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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