Protein Alignment Ppa and Fbxo33

DIOPT Version :9

• Sequence 1: NP_001261138.1
• Gene: Ppa / 37602
• FlyBaseID: FBgn0020257
• Length: 562
• Species: Drosophila melanogaster
• Sequence 2: XP_006240181.1
• Gene: Fbxo33 / 314157
• RGDID: 1307543
• Length: 563
• Species: Rattus norvegicus
• Alignment Length: 442
• Identity: 98/442 - (22%)
• Similarity: 146/442 - (33%)
• Gaps: 141/442 - (31%)

  Fly   150 SNLFPELLEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKRSSPSLFNCLVKRGI 214
            ::|..||:..||..||..|..||:..|:.||:..:..::|             |.|..||.....
  Rat    72 ASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALW-------------PQLRICLRVSPA 123

  Fly   215 KKVQILSLRRSLKDLV--LGVPALTSLNLSGCFNVADMNLGHAFSVDLPN--------------- 262
            ::.::..|.|.....|  |.|.......|||.....|.. |.....|..|
  Rat   124 EQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGG-GSGGGTDTGNGGEESEALQLSSRWL 187

  Fly   263 --LKT-LDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCW 324
              |:. |:|.||..::       .::.|||:...|.|..::
  Rat   188 EVLRIYLELVLCVLLS-------IRNNRNLQKFSLFGDISV------------------------ 221

  Fly   325 HISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVS-VTDS 388
             :..||.......||...:|.      .::..|:|.:|.|.:..|    ||.::..|.:. ||.|
  Rat   222 -VQQQGSLSSTYLSRVDPDGK------KIKQIQQLFEEILSNSRQ----LKWLSCGFMLEIVTPS 275

  Fly   389 GLKHLAR--MPKLEQLNLRSCDNI---SDIGMAYLTEGGSGINSLDVSFCDKISDQA-------- 440
            .|..|:.  ...:|.|:|.. :||   |.:..|...|....:.||.:.|||..::.|
  Rat   276 SLSSLSNSIANTMEHLSLLD-NNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDSNH 339

  Fly   441 --------LTHIAQGLYRLRSLS---------------------LNQCQITDHGMLKIAKALHEL 476
                    |.|.|..:  |:||.                     |....:....||||.|....|
  Rat   340 VPLQRLSLLVHNASVM--LKSLDNMPNDEHWKALSRKSSSLRVYLMAFDVKSEDMLKILKPSIPL 402

  Fly   477 ENLN------------IGQCSRITDKGLQ--TLAEDLTNLKTIDLYGCTQLS 514
            |.::            :...||..||.|.  .|..|:     ||..|...||
  Rat   403 ERVHFDSYVTCVSGAIVDLISRQYDKFLTHFILMNDM-----IDTSGFPDLS 449

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689	13/39 (33%)
		AMN1	<226..>334	CDD:187754	22/127 (17%)
		leucine-rich repeat	236..256	CDD:275381	5/19 (26%)
		leucine-rich repeat	263..288	CDD:275381	5/25 (20%)
		leucine-rich repeat	289..314	CDD:275381	3/24 (13%)
		leucine-rich repeat	315..347	CDD:275381	5/31 (16%)
		AMN1	347..524	CDD:187754	53/225 (24%)
		leucine-rich repeat	348..373	CDD:275381	5/24 (21%)
		leucine-rich repeat	374..398	CDD:275381	8/26 (31%)
		leucine-rich repeat	399..424	CDD:275381	8/27 (30%)
		leucine-rich repeat	425..450	CDD:275381	9/40 (23%)
		leucine-rich repeat	451..475	CDD:275381	9/44 (20%)
		leucine-rich repeat	476..501	CDD:275381	9/38 (24%)
Fbxo33	XP_006240181.1	F-box-like	72..119	CDD:289689	17/59 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910