DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppa and Fbxl5

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001153435.1 Gene:Fbxl5 / 242960 MGIID:2152883 Length:690 Species:Mus musculus


Alignment Length:520 Identity:113/520 - (21%)
Similarity:178/520 - (34%) Gaps:159/520 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 ASPESPPPVEGTHISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKR 200
            |..|:......|.|::|.||::..||.:|..::|.|.:||.|.|...|...|:||.: ..:|..|
Mouse   192 ADTEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKHL-YPVHWAR 255

  Fly   201 ----SSPSL-----------------------------------------------FNCLVKRGI 214
                |.|:.                                               ....|..|:
Mouse   256 GDWYSGPATELDTEPDEEWVRNRKDESRAFQEWDEDADIDESEESAEESVAISIAQMEKRVLHGL 320

  Fly   215 KKVQILSLRRSLKDLVLGVPALTSLN-----LSGCFNVADMNLGHAFSVD-----------LPNL 263
            ....:..:..|:|.|||...:..|..     |..|.|:..::|......|           ..:|
Mouse   321 IHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGCCQSL 385

  Fly   264 KTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIA-------WGLK--KLKHLN 319
            :.||||.|::|||.:|.:|::.|         |......:|.|..|       |..|  .:....
Mouse   386 RHLDLSGCEKITDMALEKISRAL---------GVLTSHQSGFLKSAGKAASTPWTSKDITMPSTT 441

  Fly   320 LRSCWH-ISDQGIG------HLAGFSRETAEGNLQLEYLGLQDCQRLSD------------EAL- 364
            ..:|.| ::|:|||      |  .::...:..:|...|:.:.|.:.|:|            |:| 
Mouse   442 QYACLHNLTDKGIGEEIDNEH--SWTEPVSSESLTSPYVWMLDAEDLADIEDAVEWRHRNVESLC 504

  Fly   365 --------GHIAQGLTSLKSINL--------------------SFCVSVTDSGLKHLARMPKLEQ 401
                    |..:.|..|...:.|                    |||  .|.:.|:.:..:|....
Mouse   505 VMETASNFGCSSSGCYSKDIVGLRTSVCWQQHCASPAFAYCGHSFC--CTGTALRTMTTLPATSA 567

  Fly   402 LNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQC-QITDHG 465
            :..::.......|...            :.|..:.|||....:      |..|||:.| ||||||
Mouse   568 MCRKALRTTLPRGKDL------------IYFGSEKSDQETGRV------LLFLSLSGCYQITDHG 614

  Fly   466 M--LKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQ 528
            :  |.:...|..||:||:..|..:|..|||.|.....:|.....|.|..::....|.......||
Mouse   615 LRALTLGGGLPYLEHLNLSGCLTVTGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASGCQNLQ 679

  Fly   529  528
            Mouse   680  679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 15/40 (38%)
AMN1 <226..>334 CDD:187754 34/139 (24%)
leucine-rich repeat 236..256 CDD:275381 5/24 (21%)
leucine-rich repeat 263..288 CDD:275381 12/24 (50%)
leucine-rich repeat 289..314 CDD:275381 6/33 (18%)
leucine-rich repeat 315..347 CDD:275381 7/38 (18%)
AMN1 347..524 CDD:187754 48/220 (22%)
leucine-rich repeat 348..373 CDD:275381 8/45 (18%)
leucine-rich repeat 374..398 CDD:275381 6/43 (14%)
leucine-rich repeat 399..424 CDD:275381 1/24 (4%)
leucine-rich repeat 425..450 CDD:275381 4/24 (17%)
leucine-rich repeat 451..475 CDD:275381 13/26 (50%)
leucine-rich repeat 476..501 CDD:275381 10/24 (42%)
Fbxl5NP_001153435.1 Hemerythrin-like. /evidence=ECO:0000250 1..159
Hr_FBXL5 7..160 CDD:213984
F-box-like 205..249 CDD:289689 17/44 (39%)
leucine-rich repeat 333..353 CDD:275381 5/19 (26%)
AMN1 <340..>404 CDD:187754 16/63 (25%)
LRR 1 340..364 4/23 (17%)
leucine-rich repeat 358..384 CDD:275381 2/25 (8%)
LRR 2 365..392 5/26 (19%)
leucine-rich repeat 385..410 CDD:275381 12/33 (36%)
LRR 3 393..418 8/33 (24%)
leucine-rich repeat 411..499 CDD:275381 17/89 (19%)
LRR 4 478..507 5/28 (18%)
leucine-rich repeat 500..539 CDD:275381 6/38 (16%)
leucine-rich repeat 540..571 CDD:275381 6/32 (19%)
leucine-rich repeat 573..626 CDD:275381 18/70 (26%)
LRR 5 575..606 9/48 (19%)
AMN1 <602..>653 CDD:187754 22/50 (44%)
LRR 6 607..634 13/26 (50%)
leucine-rich repeat 627..652 CDD:275381 10/24 (42%)
LRR 7 635..660 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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