Protein Alignment Ppa and skpt-1

DIOPT Version :9

• Sequence 1: NP_001261138.1
• Gene: Ppa / 37602
• FlyBaseID: FBgn0020257
• Length: 562
• Species: Drosophila melanogaster
• Sequence 2: NP_741137.1
• Gene: skpt-1 / 175749
• WormBaseID: WBGene00018613
• Length: 421
• Species: Caenorhabditis elegans
• Alignment Length: 373
• Identity: 87/373 - (23%)
• Similarity: 134/373 - (35%)
• Gaps: 102/373 - (27%)

  Fly   155 ELLEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKRSSPSLFNCLVKRGIKKVQI 219
            |:.||||.:|..:||..|..||..:....:....|...:|     :..|.....|:....:|:::
 Worm    96 EITEQIFSNLKKKDLLSAMLVCHRFYGIGHKSRNWIITDA-----QDRPISEISLIALSQRKIKV 155

  Fly   220 LSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSL-------------- 270
            |.|..:..|.:|.               ||..|.....:....|:.||||.
 Worm   156 LRLAGAKADRILR---------------ADERLVEVALLSTSRLELLDLSRTNLTARQMQIMLKP 205

  Fly   271 CKQITDTSL--GRIAQHL-------RNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHI 326
            |:::...|:  .::..|:       |.|..|::.....||..|..||....|.|:.|||..|
 Worm   206 CQKLKCLSIEGNQLDDHVAICIAENRGLRELDISMTNGITANGASLIFRNCKDLQQLNLAWC--- 267

  Fly   327 SDQGIGHLAGFSRETAEGNLQLEYLGL-QDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGL 390
                                     || |....:...::|.      .||.:|||..|.......
 Worm   268 -------------------------GLTQPIVTVIIHSIGE------KLKKLNLSGTVRNFGINN 301

  Fly   391 KHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLS 455
            ||      :|.|..:|         .|:|:       ||:|...:|||..|..|.....||.::|
 Worm   302 KH------IEILAAKS---------NYVTD-------LDLSDNVEISDPGLAVILNKFPRLTTIS 344

  Fly   456 LNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLK 503
            ||:|...|..|:....:...|..||:..|  ::|..::...|..:|||
 Worm   345 LNRCYGLDPNMVVHFNSKPSLVYLNVHGC--VSDTNMELFLEMCSNLK 390

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689	11/34 (32%)
		AMN1	<226..>334	CDD:187754	27/130 (21%)
		leucine-rich repeat	236..256	CDD:275381	3/19 (16%)
		leucine-rich repeat	263..288	CDD:275381	8/47 (17%)
		leucine-rich repeat	289..314	CDD:275381	7/24 (29%)
		leucine-rich repeat	315..347	CDD:275381	5/31 (16%)
		AMN1	347..524	CDD:187754	42/158 (27%)
		leucine-rich repeat	348..373	CDD:275381	4/25 (16%)
		leucine-rich repeat	374..398	CDD:275381	8/23 (35%)
		leucine-rich repeat	399..424	CDD:275381	5/24 (21%)
		leucine-rich repeat	425..450	CDD:275381	8/24 (33%)
		leucine-rich repeat	451..475	CDD:275381	7/23 (30%)
		leucine-rich repeat	476..501	CDD:275381	6/24 (25%)
skpt-1	NP_741137.1	F-box-like	92..130	CDD:372399	11/33 (33%)
		AMN1	150..373	CDD:187754	66/293 (23%)
		leucine-rich repeat	153..183	CDD:275381	7/44 (16%)
		leucine-rich repeat	184..208	CDD:275381	6/23 (26%)
		leucine-rich repeat	209..232	CDD:275381	2/22 (9%)
		leucine-rich repeat	233..258	CDD:275381	7/24 (29%)
		leucine-rich repeat	259..284	CDD:275381	9/58 (16%)
		leucine-rich repeat	285..313	CDD:275381	11/42 (26%)
		leucine-rich repeat	314..339	CDD:275381	9/31 (29%)
		leucine-rich repeat	340..362	CDD:275381	7/21 (33%)
		leucine-rich repeat	365..388	CDD:275381	6/24 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160162684
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840