Protein Alignment Ppa and B0393.3

DIOPT Version :9

• Sequence 1: NP_001261138.1
• Gene: Ppa / 37602
• FlyBaseID: FBgn0020257
• Length: 562
• Species: Drosophila melanogaster
• Sequence 2: NP_497980.1
• Gene: B0393.3 / 175630
• WormBaseID: WBGene00007168
• Length: 621
• Species: Caenorhabditis elegans
• Alignment Length: 415
• Identity: 98/415 - (23%)
• Similarity: 159/415 - (38%)
• Gaps: 98/415 - (23%)

  Fly   144 VEGTHISNLFPELLEQIFEHLPVRD-LGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKRSSPSLFN 207
            |:.:.:..|...:|:.|.||:|::| |.:...||....|:
 Worm    30 VQNSALLQLKDSILDIIVEHVPLKDRLLKLRPVCHRLSDS------------------------- 69

  Fly   208 CLVKRGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSVDL------------ 260
              |||.:|.|:.|   |...|..........|.:.| .||..||.....|..|
 Worm    70 --VKRSVKSVEFL---RDELDYCDDAKISFFLAVYG-KNVQHMNYDLFRSCSLREYTQWSWRQSV 128

  Fly   261 -------PNLKTLDLSLC--KQITDTSLGRIAQHLRNLETLE-----LGGCCNITNTGLLLIAWG 311
                   |.||.||:.:|  .::.|..|..|.:....||.|.     :.|.|         .:..
 Worm   129 ISSVTRCPQLKQLDILICCRHRLRDGDLQVIFKQCNQLEELRMDASYINGHC---------FSKA 184

  Fly   312 LKKLKHLNLRSCWHISDQG-IGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLK 375
            .:.|:.|.|..|..::.|| ||..:...:      ||..::.|..|   .||.|......:.|||
 Worm   185 PQTLRKLELECCQTLNKQGFIGMCSRLFK------LQTLHVSLMQC---IDEQLIKRIGDMKSLK 240

  Fly   376 SINLSFCVSVTDSG-------LKHLARMPKLEQLNLRSCDNISDIGMAYLTE-----GGSGINSL 428
            ::::     |.|..       |..:.|:.||..|.|...:|::|..:..|::     .||.|..|
 Worm   241 NLSV-----VADPDQKMNQFRLAEIRRLSKLTTLCLDGVNNVTDKFLGDLSDLSTSPAGSSIEHL 300

  Fly   429 DVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITD--HGMLKIAKALHELENLNIGQCSRITDKG 491
            .:|||..|....::.: :.|..|:||:|:.....|  .|:..|.:| ..||.|.:.:.:.:..|.
 Worm   301 SLSFCKNIGSNGISKL-KTLPNLKSLNLDGVSKRDISTGLEAIGQA-GRLERLLVSEDTYVNPKT 363

  Fly   492 LQTLAEDLTNLKTIDLYGCTQLSSK 516
            :........:|:|:|:.|..:|..|
 Worm   364 IAEFVNTCESLRTLDISGNHRLKDK 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689	11/41 (27%)
		AMN1	<226..>334	CDD:187754	31/134 (23%)
		leucine-rich repeat	236..256	CDD:275381	6/19 (32%)
		leucine-rich repeat	263..288	CDD:275381	8/26 (31%)
		leucine-rich repeat	289..314	CDD:275381	5/29 (17%)
		leucine-rich repeat	315..347	CDD:275381	8/32 (25%)
		AMN1	347..524	CDD:187754	47/184 (26%)
		leucine-rich repeat	348..373	CDD:275381	5/24 (21%)
		leucine-rich repeat	374..398	CDD:275381	6/30 (20%)
		leucine-rich repeat	399..424	CDD:275381	7/29 (24%)
		leucine-rich repeat	425..450	CDD:275381	7/24 (29%)
		leucine-rich repeat	451..475	CDD:275381	8/25 (32%)
		leucine-rich repeat	476..501	CDD:275381	4/24 (17%)
B0393.3	NP_497980.1	leucine-rich repeat	103..137	CDD:275381	5/33 (15%)
		leucine-rich repeat	138..165	CDD:275381	8/26 (31%)
		leucine-rich repeat	188..213	CDD:275381	8/24 (33%)
		leucine-rich repeat	214..265	CDD:275381	14/58 (24%)
		LRR	232..>389	CDD:227223	41/164 (25%)
		AMN1	<262..408	CDD:187754	35/129 (27%)
		leucine-rich repeat	266..296	CDD:275381	7/29 (24%)
		leucine-rich repeat	297..321	CDD:275381	7/24 (29%)
		leucine-rich repeat	348..373	CDD:275381	4/24 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810