DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppa and FBXL16

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_699181.2 Gene:FBXL16 / 146330 HGNCID:14150 Length:479 Species:Homo sapiens


Alignment Length:503 Identity:134/503 - (26%)
Similarity:220/503 - (43%) Gaps:102/503 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ELPGLTR-TGATTTHHHLLRFTPYALHHR-----PPHHQLQTLPP---ALYLQHAAAAAA----A 113
            :|||... .||.:    :.:.|| |..:|     ||    .||||   |..|..||.|..    |
Human    22 KLPGQPNGLGAAS----ITKGTP-ATKNRPCQPPPP----PTLPPPSLAAPLSRAALAGGPCTPA 77

  Fly   114 AAAAAAHAQHHHHHHHHLPHRPASPESPPPVEGTHISNLFPELLEQIFEHLPVRDLGRAAQVCTA 178
            ...|:|.|             |..|...||:....      ::|..:|.:....:....||||.|
Human    78 GGPASALA-------------PGHPAERPPLATDE------KILNGLFWYFSACEKCVLAQVCKA 123

  Fly   179 WRDAAYAKSVWKGVEAKLHLKRSSPSLFNCLVKRGIKKVQILSLRRSLKDLVLGVPALTSLNLSG 243
            ||...|....|.|:...||.|    .|:|.| ..|.|:.                     :||.|
Human   124 WRRVLYQPKFWAGLTPVLHAK----ELYNVL-PGGEKEF---------------------VNLQG 162

  Fly   244 ---------CF-NVADMNLGH---AFSVDLPNLKTLDLSLCKQITDTSLGRIAQHLRNLETLELG 295
                     |. .|:|:::..   .:::....:|.:.|.. ..|||..|..:.:.::.:..|||.
Human   163 FAARGFEGFCLVGVSDLDICEFIDNYALSKKGVKAMSLKR-STITDAGLEVMLEQMQGVVRLELS 226

  Fly   296 GCCNITNTGLLLIAWG--LKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQR 358
            ||.:.|..||    |.  ..::..|::..|.:::|..|..::......||.:||        ...
Human   227 GCNDFTEAGL----WSSLSARITSLSVSDCINVADDAIAAISQLLPNLAELSLQ--------AYH 279

  Fly   359 LSDEALGHIA--QGLTSLKSINLSFCVSVTDSGLKHLAR-MPKLEQLNLRSCDNISDIGMAYLTE 420
            ::|.||.:..  || .|..::.|..|..:|:.|:.::.. :|.|..|:|..|..::|.|:..:.|
Human   280 VTDTALAYFTARQG-HSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSKVTDDGVELVAE 343

  Fly   421 GGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQC-QITDHGMLKIAKALHELENLNIGQC 484
            ....:.|||:|:|.:|:|.||.::|..|:||..|.|::| :|||.| |.....:..|.:|.:..|
Human   344 NLRKLRSLDLSWCPRITDMALEYVACDLHRLEELVLDRCVRITDTG-LSYLSTMSSLRSLYLRWC 407

  Fly   485 SRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNL 532
            .::.|.||:.|.. |.:|:.:.|.||..|::.|:..:::|.:|::|.|
Human   408 CQVQDFGLKHLLA-LGSLRLLSLAGCPLLTTTGLSGLVQLQELEELEL 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 10/40 (25%)
AMN1 <226..>334 CDD:187754 25/122 (20%)
leucine-rich repeat 236..256 CDD:275381 6/32 (19%)
leucine-rich repeat 263..288 CDD:275381 6/24 (25%)
leucine-rich repeat 289..314 CDD:275381 9/26 (35%)
leucine-rich repeat 315..347 CDD:275381 6/31 (19%)
AMN1 347..524 CDD:187754 54/180 (30%)
leucine-rich repeat 348..373 CDD:275381 5/26 (19%)
leucine-rich repeat 374..398 CDD:275381 4/24 (17%)
leucine-rich repeat 399..424 CDD:275381 7/24 (29%)
leucine-rich repeat 425..450 CDD:275381 11/24 (46%)
leucine-rich repeat 451..475 CDD:275381 9/24 (38%)
leucine-rich repeat 476..501 CDD:275381 8/24 (33%)
FBXL16NP_699181.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 15/48 (31%)
AMN1 201..413 CDD:332986 63/226 (28%)
leucine-rich repeat 220..243 CDD:275381 9/26 (35%)
leucine-rich repeat 244..269 CDD:275381 4/24 (17%)
LRR 1 244..266 4/21 (19%)
LRR 2 267..290 7/30 (23%)
leucine-rich repeat 270..295 CDD:275381 9/33 (27%)
leucine-rich repeat 296..321 CDD:275381 4/24 (17%)
LRR 3 319..343 7/23 (30%)
leucine-rich repeat 322..347 CDD:275381 7/24 (29%)
LRR 4 345..369 9/23 (39%)
leucine-rich repeat 348..373 CDD:275381 11/24 (46%)
LRR 5 371..395 11/24 (46%)
leucine-rich repeat 374..398 CDD:275381 9/24 (38%)
LRR 6 396..420 7/23 (30%)
LRR 7 446..470 4/9 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.