Protein Alignment Ppa and CG43064

DIOPT Version :9

• Sequence 1: NP_001261138.1
• Gene: Ppa / 37602
• FlyBaseID: FBgn0020257
• Length: 562
• Species: Drosophila melanogaster
• Sequence 2: NP_001246726.1
• Gene: CG43064 / 12798207
• FlyBaseID: FBgn0262366
• Length: 481
• Species: Drosophila melanogaster
• Alignment Length: 552
• Identity: 117/552 - (21%)
• Similarity: 191/552 - (34%)
• Gaps: 162/552 - (29%)

  Fly    28 SGSNGAATSGGAAIGG---AGAGGAPSWAMDELYQQTELPGLTRT----GATTTHHH--LLRFTP 83
            |....|.|:.|..|.|   :..|||..  .:...:|..:..|.|:    |.:|||..  :.....
  Fly     9 SAITNATTTEGNRISGTKRSNDGGAGE--QESRPKQRTIAQLDRSTCSAGPSTTHPSTTIFALNT 71

  Fly    84 YA-------------LHHRPPHHQLQTLPPALYLQHAAAAAAAAAAAAAHAQHHHHHHHHLPHRP 135
            |.             |:....:|||:.|..|  |||.......:...:..........:.:....
  Fly    72 YCWDMILSYLSLSEQLYLATSNHQLKMLFEA--LQHRYKIIGESDIGSIGEMELQKLLYIVGEHV 134

  Fly   136 ASPESPPPVEGTHISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKR 200
            .|.|||......|..:|:           .:||      .|...|                |||
  Fly   135 ISYESPLDPHSGHDQHLW-----------ILRD------YCPNLR----------------HLK- 165

  Fly   201 SSPSLFNCLVKRGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSV---DLPN 262
                               :|.||...:.:|.:.:||||:.|  .:..|..|...|.:   |||:
  Fly   166 -------------------MSFRRPRWNPLLKLKSLTSLHAS--LHFTDEGLYKDFIISLSDLPH 209

  Fly   263 LKTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHIS 327
            ||.|.|.......|.     .:.|..||.||:|.......:.|......:|||.|||:
  Fly   210 LKKLKLEATSYTGDG-----LRALDKLEYLEIGNQRGFDASILASCCMTMKKLCHLNM------- 262

  Fly   328 DQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKH 392
                      ...||  ||:.|...:             |.:...:|:|  |:|.:.:.:..:.:
  Fly   263 ----------GENTA--NLEAEDFRV-------------IVRRGKNLES--LAFSLILLEGNVPY 300

  Fly   393 --LARMPKLEQLNLRSCDNISDIGMAY----LTEGGSGINSL----------------DVSFCDK 435
              :.::|||:.|.|...|| ..|..::    :.:.|:.:.||                ::|...:
  Fly   301 DTVHQLPKLKHLQLWYRDN-KFISKSFIEKLIQKPGTPLESLILMGNTLKLEEVDAICEISSLRE 364

  Fly   436 ISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLT 500
            :.....|..|:...||:.|     :|.|..||.::.  .||..| :.:|:.:....:: .|.::|
  Fly   365 LFVSCKTDAARSFLRLKHL-----EILDVKMLYVSN--DELLAL-LEECALLNVLSVR-FAREIT 420

  Fly   501 ---NLKTIDLYGCTQ----LSSKGIDIIMKLP 525
               .||.:.||...:    |....:|..:.||
  Fly   421 FEFVLKALSLYSHRKIKIYLHESSVDWSLNLP 452

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689	5/40 (13%)
		AMN1	<226..>334	CDD:187754	30/110 (27%)
		leucine-rich repeat	236..256	CDD:275381	7/19 (37%)
		leucine-rich repeat	263..288	CDD:275381	6/24 (25%)
		leucine-rich repeat	289..314	CDD:275381	6/24 (25%)
		leucine-rich repeat	315..347	CDD:275381	7/31 (23%)
		AMN1	347..524	CDD:187754	39/205 (19%)
		leucine-rich repeat	348..373	CDD:275381	2/24 (8%)
		leucine-rich repeat	374..398	CDD:275381	4/25 (16%)
		leucine-rich repeat	399..424	CDD:275381	7/28 (25%)
		leucine-rich repeat	425..450	CDD:275381	5/40 (13%)
		leucine-rich repeat	451..475	CDD:275381	6/23 (26%)
		leucine-rich repeat	476..501	CDD:275381	5/27 (19%)
CG43064	NP_001246726.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910