DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppa and AgaP_AGAP004167

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_313054.2 Gene:AgaP_AGAP004167 / 1273991 VectorBaseID:AGAP004167 Length:384 Species:Anopheles gambiae


Alignment Length:385 Identity:91/385 - (23%)
Similarity:154/385 - (40%) Gaps:64/385 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 HISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKRSSPSLFNC--LV 210
            |..:|..||:.:||::||:||:..|:.||..|....:::......:.:|:|..|.|.|...  |:
Mosquito    10 HFDDLPFELVCEIFDYLPLRDVKTASSVCQRWNAIIFSEVYIHRFQLQLNLDYSLPVLKQMAQLL 74

  Fly   211 KRGIKKVQILSLRRS---------LKDLVLGVPALTSLNLSGCFNVADMNLGHAFSVDL---PNL 263
            :...::...:.||.:         |:.:.|.:..|.|.:.|..||:||..:....|..|   ..|
Mosquito    75 EASDREYYSVVLRANLGSPLTDARLRIVKLMIRLLASRSESLYFNMADFRIESCVSERLLRGRKL 139

  Fly   264 KTLD-----LSLCKQITDTSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSC 323
            :.:|     :.|...:.::.|..|.::...|..|.:.. .||.|...|:   .|..||||.|.. 
Mosquito   140 QVIDTRAKYIPLGMGLKESMLAAICEYAVELVDLVIAE-MNINNPKALV---PLSSLKHLKLLL- 199

  Fly   324 WHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDS 388
              |||        :..........:...||:                       |||. :.|||.
Mosquito   200 --ISD--------YYPYVKPPEPPINLPGLE-----------------------NLSL-IKVTDE 230

  Fly   389 GLKHLARMPKLEQLNLRSCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRS 453
            .. |..|:..|::..:.|....:...|.::|:..:.::.|.:.|..: |.|| ..|...|.|..:
Mosquito   231 SC-HYFRVDNLKRFFIHSTGTDAPRTMDFITQNITQVSRLCLHFTAR-SIQA-EMIFGWLDRFPN 292

  Fly   454 -LSLNQCQITDHG-MLKIAKALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCT 511
             |:|....:...| :||.....:.|:.|....| .:....|..|.|.|..|:.:.|.||:
Mosquito   293 LLALELAGVALPGDVLKQLSPANRLQKLIFVSC-HLETLQLDGLLEKLAKLRLLCLDGCS 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 13/40 (33%)
AMN1 <226..>334 CDD:187754 31/115 (27%)
leucine-rich repeat 236..256 CDD:275381 7/19 (37%)
leucine-rich repeat 263..288 CDD:275381 5/29 (17%)
leucine-rich repeat 289..314 CDD:275381 7/24 (29%)
leucine-rich repeat 315..347 CDD:275381 8/31 (26%)
AMN1 347..524 CDD:187754 38/167 (23%)
leucine-rich repeat 348..373 CDD:275381 2/24 (8%)
leucine-rich repeat 374..398 CDD:275381 8/23 (35%)
leucine-rich repeat 399..424 CDD:275381 4/24 (17%)
leucine-rich repeat 425..450 CDD:275381 7/24 (29%)
leucine-rich repeat 451..475 CDD:275381 5/25 (20%)
leucine-rich repeat 476..501 CDD:275381 7/24 (29%)
AgaP_AGAP004167XP_313054.2 F-box-like 11..>48 CDD:289689 13/36 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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