DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppa and AgaP_AGAP009335

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_310005.4 Gene:AgaP_AGAP009335 / 1271246 VectorBaseID:AGAP009335 Length:299 Species:Anopheles gambiae


Alignment Length:324 Identity:75/324 - (23%)
Similarity:123/324 - (37%) Gaps:90/324 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 WRDAAYAKSVWKGVEAKLHLK-----RSSPSLFNCLVKRGIKKVQILSLRRSLKDLVLGVPALTS 238
            |.|..|.|     :...|.||     |....|....|..|::::|                   .
Mosquito    28 WEDVLYVK-----LFPLLSLKDLFNLRCCSHLAKTFVDNGLRRLQ-------------------E 68

  Fly   239 LNLSGCFNVADMNLGHAFSVD-LPNLKTLDLSLCKQITDTSLGRIAQHLRNLETLELGGCCNITN 302
            :|||| .|...::|......| ..|::.::|:.|..:.|:.|..:.:|.|.|..:.|..|.|||.
Mosquito    69 INLSG-NNSPHLDLALTVLADNCRNVRVVNLARCNWLQDSVLCPLLKHNRRLTKINLSECLNITP 132

  Fly   303 TGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHI 367
            ..:..|..|.|:|..|.|..|..::   ||.:...:..    :.:|:.|.:..|..|::..:...
Mosquito   133 RSMQPIIIGCKQLTTLKLSHCHWLT---IGAMEALTLH----HTKLQELDVSHCAALNERCISVF 190

  Fly   368 AQGLTSLKSINLSFCVSVTDSGLKHLARMPK-LEQLNLRSCDNISDIGMAYLTEGGSGINSLDVS 431
            ......||:::||...:|||:.|..:|:..| ::.|||..|         ||             
Mosquito   191 LLSCRMLKTLSLSNVPAVTDNLLFAIAKHSKFIKNLNLVGC---------YL------------- 233

  Fly   432 FCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTL 495
                                         |||.|:|.:|....|||:|.:.:|..:|::.|..|
Mosquito   234 -----------------------------ITDRGVLALAFCCKELESLMVRECPHVTERSLAVL 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 4/10 (40%)
AMN1 <226..>334 CDD:187754 29/108 (27%)
leucine-rich repeat 236..256 CDD:275381 6/19 (32%)
leucine-rich repeat 263..288 CDD:275381 5/24 (21%)
leucine-rich repeat 289..314 CDD:275381 8/24 (33%)
leucine-rich repeat 315..347 CDD:275381 6/31 (19%)
AMN1 347..524 CDD:187754 34/150 (23%)
leucine-rich repeat 348..373 CDD:275381 4/24 (17%)
leucine-rich repeat 374..398 CDD:275381 9/23 (39%)
leucine-rich repeat 399..424 CDD:275381 6/24 (25%)
leucine-rich repeat 425..450 CDD:275381 0/24 (0%)
leucine-rich repeat 451..475 CDD:275381 6/23 (26%)
leucine-rich repeat 476..501 CDD:275381 7/20 (35%)
AgaP_AGAP009335XP_310005.4 leucine-rich repeat 40..53 CDD:275381 4/12 (33%)
leucine-rich repeat 66..92 CDD:275381 8/45 (18%)
leucine-rich repeat 93..118 CDD:275381 5/24 (21%)
AMN1 117..>268 CDD:187754 49/208 (24%)
leucine-rich repeat 119..144 CDD:275381 8/24 (33%)
leucine-rich repeat 145..170 CDD:275381 6/31 (19%)
leucine-rich repeat 171..196 CDD:275381 4/24 (17%)
leucine-rich repeat 197..222 CDD:275381 9/24 (38%)
leucine-rich repeat 223..248 CDD:275381 12/75 (16%)
leucine-rich repeat 249..268 CDD:275381 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.