DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppa and AgaP_AGAP005273

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_309061.4 Gene:AgaP_AGAP005273 / 1270408 VectorBaseID:AGAP005273 Length:1405 Species:Anopheles gambiae


Alignment Length:475 Identity:104/475 - (21%)
Similarity:177/475 - (37%) Gaps:150/475 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 KSVWKGVEAK-LHLKRSSPSLFNCLVKRGIKKVQILSLRR------SLKDLVL----GVPALTSL 239
            :..:||:|.. |.:|.|    ||.:.  .::|..:..|||      |:.||.:    .:..|..|
Mosquito   458 EDTFKGLEGTLLEIKLS----FNRIA--SLRKFVLPKLRRLDLSANSIDDLAIDSFHSLHNLLYL 516

  Fly   240 NLSGCFNVADMNLGHAFSVDLPNLKTLDLSLC--KQI------TDTSLGRIAQHLRN-LETLELG 295
            |:||..:|..:.  ......|..|:.:|||.|  |.:      .:|.| |||....| |..:|.|
Mosquito   517 NMSGNEHVGQVT--RTMIYPLTKLQVIDLSHCGLKMLQADLFHNNTDL-RIALLNHNQLRVIEEG 578

  Fly   296 GCCNITNT-GLLLIAWGLKKLK------HLNLRSCWHISDQGIGHLAG--FSRETAEGNLQLEYL 351
            ...|:.|. .|.|...||::|:      .:|||:. ::....:..|..  |:.|||     ||.|
Mosquito   579 TFLNLNNLFDLSLAGNGLEQLRPRSFVNTVNLRTL-NLRQNALQELRADMFTTETA-----LEVL 637

  Fly   352 GLQDCQRLSDEALGHIAQG----------------------------LTSLKSINLS----FCVS 384
            .      .||.||...|..                            |..|:.|:|:    ..:.
Mosquito   638 D------ASDNALKSFATNTLKIHPRLRKVLLANNRLEVFPPELIADLDHLEVIDLAGNRLTTIQ 696

  Fly   385 VTDSGLKHLARMPKLEQLNLR--SCDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQG 447
            ..|.|     |:..|.:|.||  :.|::.|  ||:.......|..|..:..:::|:::.    :|
Mosquito   697 QLDFG-----RLANLRELYLRANTIDSVQD--MAFHNSSQLQILDLAANRLERLSERSF----EG 750

  Fly   448 LYRLRSLSLNQCQITDHGMLKIAKA-LHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDL---- 507
            ..||..|.|:..::|......:||: :..||.:::.. :::....:....:....|:|:||    
Mosquito   751 TLRLDRLDLSDNKLTGLPEQVLAKSRVQRLERVSLAG-NKLASVPVAAFGDQHDTLQTLDLSRNA 814

  Fly   508 -------------------YGCTQLSSKGIDIIMKLPK----------------------LQKLN 531
                               :....|:.:.|..::..||                      |:.||
Mosquito   815 IREVPRASHMLMINAKHVDFSYNPLTPEAIATVLGQPKTVRTLNLAGTGVRELPMLETPYLRSLN 879

  Fly   532 LGLWLVRXCVHHDCNACAAK 551
            |.        |::.:|.:||
Mosquito   880 LS--------HNNISAVSAK 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 0/3 (0%)
AMN1 <226..>334 CDD:187754 34/127 (27%)
leucine-rich repeat 236..256 CDD:275381 6/19 (32%)
leucine-rich repeat 263..288 CDD:275381 11/32 (34%)
leucine-rich repeat 289..314 CDD:275381 9/25 (36%)
leucine-rich repeat 315..347 CDD:275381 9/39 (23%)
AMN1 347..524 CDD:187754 42/234 (18%)
leucine-rich repeat 348..373 CDD:275381 9/52 (17%)
leucine-rich repeat 374..398 CDD:275381 6/27 (22%)
leucine-rich repeat 399..424 CDD:275381 8/26 (31%)
leucine-rich repeat 425..450 CDD:275381 4/24 (17%)
leucine-rich repeat 451..475 CDD:275381 6/24 (25%)
leucine-rich repeat 476..501 CDD:275381 2/24 (8%)
AgaP_AGAP005273XP_309061.4 leucine-rich repeat 98..121 CDD:275380
LRR_RI <99..285 CDD:238064
LRR_8 124..187 CDD:290566
leucine-rich repeat 124..152 CDD:275380
leucine-rich repeat 153..176 CDD:275380
LRR_8 175..235 CDD:290566
leucine-rich repeat 177..200 CDD:275380
leucine-rich repeat 201..224 CDD:275380
LRR_8 224..283 CDD:290566
leucine-rich repeat 225..248 CDD:275380
leucine-rich repeat 249..272 CDD:275380
LRR_RI 273..522 CDD:238064 20/69 (29%)
LRR_8 273..329 CDD:290566
leucine-rich repeat 273..296 CDD:275380
leucine-rich repeat 297..320 CDD:275380
leucine-rich repeat 321..344 CDD:275380
leucine-rich repeat 345..368 CDD:275380
LRR_8 368..453 CDD:290566
leucine-rich repeat 369..390 CDD:275380
leucine-rich repeat 393..413 CDD:275380
leucine-rich repeat 420..442 CDD:275380
LRR_8 441..521 CDD:290566 19/68 (28%)
leucine-rich repeat 443..488 CDD:275380 9/35 (26%)
leucine-rich repeat 468..482 CDD:275378 5/19 (26%)
LRR_8 487..548 CDD:290566 18/62 (29%)
leucine-rich repeat 489..512 CDD:275380 6/22 (27%)
leucine-rich repeat 538..561 CDD:275380 6/22 (27%)
LRR_8 562..620 CDD:290566 18/59 (31%)
leucine-rich repeat 562..585 CDD:275380 9/23 (39%)
leucine-rich repeat 586..609 CDD:275380 5/22 (23%)
leucine-rich repeat 610..633 CDD:275380 5/23 (22%)
leucine-rich repeat 634..657 CDD:275380 8/28 (29%)
LRR_8 656..714 CDD:290566 11/62 (18%)
leucine-rich repeat 658..681 CDD:275380 1/22 (5%)
LRR_RI 674..935 CDD:238064 44/238 (18%)
leucine-rich repeat 682..705 CDD:275380 6/27 (22%)
LRR_8 705..764 CDD:290566 16/64 (25%)
leucine-rich repeat 706..729 CDD:275380 8/24 (33%)
LRR <725..>917 CDD:227223 29/180 (16%)
leucine-rich repeat 730..753 CDD:275380 4/26 (15%)
leucine-rich repeat 754..773 CDD:275380 4/18 (22%)
leucine-rich repeat 780..804 CDD:275380 2/24 (8%)
leucine-rich repeat 805..869 CDD:275380 8/63 (13%)
leucine-rich repeat 870..898 CDD:275380 8/30 (27%)
LRR_8 873..935 CDD:290566 8/27 (30%)
leucine-rich repeat 899..924 CDD:275380
leucine-rich repeat 925..946 CDD:275380
leucine-rich repeat 949..971 CDD:275380
leucine-rich repeat 1000..1022 CDD:275380
leucine-rich repeat 1025..1046 CDD:275380
LRRCT 1112..1159 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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