DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ppa and AT4G05475

DIOPT Version :9

Sequence 1:	NP_001261138.1	Gene:	Ppa / 37602	FlyBaseID:	FBgn0020257	Length:	562	Species:	Drosophila melanogaster
Sequence 2:	NP_001190683.1	Gene:	AT4G05475 / 10723048	AraportID:	AT4G05475	Length:	309	Species:	Arabidopsis thaliana

Alignment Length:	280	Identity:	72/280 - (25%)
Similarity:	118/280 - (42%)	Gaps:	70/280 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly   151 NLFPELLEQIFEHLPVRD-LGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKRSSPSLFNCLVKRGI 214
            :|.|||...|...|.|.| |..|.::|.|||......|:|:    |::|:       :||    :
plant    42 DLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWR----KINLR-------DCL----M 91

  Fly   215 KKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITDTSL 279
            .:....|:.|.:.||..|             .:.::|:.|.                  ::|:.|
plant    92 YEFDFESMCRHIVDLSQG-------------GLLEINIEHF------------------VSDSLL 125

  Fly   280 GRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISD----QGIGH------- 333
            ..|.....||::|.:.....:||.|::.   |::||..|.....:|.|.    :.|||
plant   126 SYIVDRSCNLKSLGISIYEPMTNKGVMN---GIEKLPLLETLVIFHSSIKLDLKAIGHACPQLKT 187

  Fly   334 --LAGFSRETAEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKH-LAR 395
              |.....|.|....|:.|:.|.:|   .|:||. ||:.:..|:.:.| ....:|::||.. |..
plant   188 LKLNSLGSELAHDISQVGYIPLLEC---DDDALA-IAESMPKLRHLQL-MGNGLTNTGLNAILDG 247

  Fly   396 MPKLEQ-LNLRSCDNISDIG 414
            .|.||: |::|.|.||:.:|
plant   248 CPHLEEHLDVRKCFNINLVG 267

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ppa	NP_001261138.1	F-box-like	149..190	CDD:289689	15/39 (38%)
		AMN1	<226..>334	CDD:187754	23/120 (19%)
		leucine-rich repeat	236..256	CDD:275381	2/19 (11%)
		leucine-rich repeat	263..288	CDD:275381	3/24 (13%)
		leucine-rich repeat	289..314	CDD:275381	6/24 (25%)
		leucine-rich repeat	315..347	CDD:275381	10/44 (23%)
		AMN1	347..524	CDD:187754	24/70 (34%)
		leucine-rich repeat	348..373	CDD:275381	8/24 (33%)
		leucine-rich repeat	374..398	CDD:275381	6/24 (25%)
		leucine-rich repeat	399..424	CDD:275381	8/17 (47%)
		leucine-rich repeat	425..450	CDD:275381
		leucine-rich repeat	451..475	CDD:275381
		leucine-rich repeat	476..501	CDD:275381
AT4G05475	NP_001190683.1	F-box-like	40..87	CDD:289689	17/48 (35%)
		leucine-rich repeat	81..111	CDD:275381	10/57 (18%)
		leucine-rich repeat	112..134	CDD:275381	5/39 (13%)
		leucine-rich repeat	135..160	CDD:275381	8/27 (30%)
		leucine-rich repeat	161..184	CDD:275381	6/22 (27%)
		leucine-rich repeat	185..206	CDD:275381	4/20 (20%)
		leucine-rich repeat	226..250	CDD:275381	6/24 (25%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810