DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppa and Fbxl14

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_598701.2 Gene:Fbxl14 / 101358 MGIID:2141676 Length:400 Species:Mus musculus


Alignment Length:389 Identity:246/389 - (63%)
Similarity:307/389 - (78%) Gaps:0/389 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 THISNLFPELLEQIFEHLPVRDLGRAAQVCTAWRDAAYAKSVWKGVEAKLHLKRSSPSLFNCLVK 211
            ||||.||||||..||.:|.|||.|||||||||||||||.||||:||||||||:|::||||..|..
Mouse     3 THISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQA 67

  Fly   212 RGIKKVQILSLRRSLKDLVLGVPALTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLCKQITD 276
            |||::||||||||||..::.|:..:.|||||||:|:.|..|||||..::.:|:.|:|||||||||
Mouse    68 RGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITD 132

  Fly   277 TSLGRIAQHLRNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQGIGHLAGFSRET 341
            :|||||||:|:.||.||||||.||||||||||||||::||.||||||.|:||.|||||||.:|..
Mouse   133 SSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSA 197

  Fly   342 AEGNLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCVSVTDSGLKHLARMPKLEQLNLRS 406
            |||.|.||.|.|||||:|:|.:|.||::|||.|:.:|||||..::|:||.||:.|..|..|||||
Mouse   198 AEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRS 262

  Fly   407 CDNISDIGMAYLTEGGSGINSLDVSFCDKISDQALTHIAQGLYRLRSLSLNQCQITDHGMLKIAK 471
            ||||||.|:.:|..|...::.||||||||:.||:|.:|||||..|:||||..|.|:|.|:.::.:
Mouse   263 CDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVR 327

  Fly   472 ALHELENLNIGQCSRITDKGLQTLAEDLTNLKTIDLYGCTQLSSKGIDIIMKLPKLQKLNLGLW 535
            .:|.|..||||||.|||||||:.:||.|:.|..|||||||:::.:|::.|.:||.|:.||||||
Mouse   328 QMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLW 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 32/40 (80%)
AMN1 <226..>334 CDD:187754 71/107 (66%)
leucine-rich repeat 236..256 CDD:275381 12/19 (63%)
leucine-rich repeat 263..288 CDD:275381 19/24 (79%)
leucine-rich repeat 289..314 CDD:275381 22/24 (92%)
leucine-rich repeat 315..347 CDD:275381 22/31 (71%)
AMN1 347..524 CDD:187754 96/176 (55%)
leucine-rich repeat 348..373 CDD:275381 15/24 (63%)
leucine-rich repeat 374..398 CDD:275381 12/23 (52%)
leucine-rich repeat 399..424 CDD:275381 15/24 (63%)
leucine-rich repeat 425..450 CDD:275381 16/24 (67%)
leucine-rich repeat 451..475 CDD:275381 9/23 (39%)
leucine-rich repeat 476..501 CDD:275381 17/24 (71%)
Fbxl14NP_598701.2 Required for down-regulation of SNAI1. /evidence=ECO:0000250 2..48 35/44 (80%)
F-box-like 5..46 CDD:403981 32/40 (80%)
AMN1 90..296 CDD:187754 130/205 (63%)
leucine-rich repeat 92..118 CDD:275381 14/25 (56%)
leucine-rich repeat 119..142 CDD:275381 18/22 (82%)
LRR 1 144..163 15/18 (83%)
leucine-rich repeat 145..170 CDD:275381 22/24 (92%)
LRR 2 170..191 15/20 (75%)
leucine-rich repeat 171..203 CDD:275381 22/31 (71%)
LRR 3 203..225 13/21 (62%)
leucine-rich repeat 204..229 CDD:275381 15/24 (63%)
AMN1 228..395 CDD:187754 90/164 (55%)
LRR 4 229..250 10/20 (50%)
leucine-rich repeat 230..254 CDD:275381 12/23 (52%)
LRR 5 254..275 13/20 (65%)
leucine-rich repeat 255..280 CDD:275381 15/24 (63%)
leucine-rich repeat 281..306 CDD:275381 16/24 (67%)
leucine-rich repeat 307..331 CDD:275381 9/23 (39%)
leucine-rich repeat 332..357 CDD:275381 17/24 (71%)
leucine-rich repeat 358..382 CDD:275381 11/23 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834665
Domainoid 1 1.000 87 1.000 Domainoid score I8047
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15271
Inparanoid 1 1.050 495 1.000 Inparanoid score I1381
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59093
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 1 1.000 - - FOG0008216
OrthoInspector 1 1.000 - - oto93185
orthoMCL 1 0.900 - - OOG6_101394
Panther 1 1.100 - - LDO PTHR13318
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5805
SonicParanoid 1 1.000 - - X6186
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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