DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppa and si:ch73-236c18.7

DIOPT Version :9

Sequence 1:NP_001261138.1 Gene:Ppa / 37602 FlyBaseID:FBgn0020257 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_021331546.1 Gene:si:ch73-236c18.7 / 100333378 ZFINID:ZDB-GENE-121214-3 Length:1015 Species:Danio rerio


Alignment Length:379 Identity:88/379 - (23%)
Similarity:151/379 - (39%) Gaps:93/379 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 FEHLPVRDLGRAAQV--------CTAWRDAAYAKSVWKG-VEAKLHLKRSSPSLFNCLVKRGIKK 216
            |.||.|::...|..|        ....|:.|..:::.|| |:..:..:.....||    .|.:..
Zfish   521 FIHLSVQEFLAAFYVFYYHVNTTMDGLRNFASVENLLKGAVDKTIESENGYLDLF----LRFLLG 581

  Fly   217 VQILSLRRSLKDLVLGV-PALTSLNLSGCFNVADMNLGHAFSVDLPNLKTLDLSLC-KQITDTSL 279
            |.:.|.:|..:||:... .:..|:..|..:....:..||..|.:    ::::|.|| .::.|.:|
Zfish   582 VSLESNQRLFQDLLTHTEKSSKSIRRSTQYIKEKIRDGHGLSTE----RSINLFLCLLEVKDQTL 642

  Fly   280 GRIAQHL-----RNLETLELGGCCNITNTGLLLIAWGLKKLKHLNLRSCWHISDQG----IGHLA 335
            .|..|..     ::.:.|....|..|.    .::....:.|..|.|:. ::.||:|    |..::
Zfish   643 SREIQEFVKSDKQSEKKLSPAHCSTIA----YMLQMSEEVLDELELQK-YNTSDEGRRRLIPAVS 702

  Fly   336 GFSRETAEG-NLQLEYLGLQDCQRLSDEALGHIAQGLTSLKSINLSFCV---------SVTDSGL 390
            ..:|....| |     |..|||:.:|           :.|:|.|   ||         .:.|||:
Zfish   703 NCTRALLAGCN-----LSAQDCEIVS-----------SVLQSSN---CVLRELDLSNNDLQDSGV 748

  Fly   391 KHLA---RMP--KLEQLNLRSCDNISDIGMAY----LTEGGSGINSLDVSFCDKISDQALTHIAQ 446
            |.|:   :.|  :||.|.|..| .:::.|..:    |:...|.:..||:|:         .|..|
Zfish   749 KLLSDGLKSPNCQLEILRLSGC-MVTEEGCGFLSSALSSNPSHLRELDLSY---------NHPGQ 803

  Fly   447 GLYRLRSLSLNQCQITDHGMLKIAKALHELENLNIGQCSRITDKGLQTLAEDLT 500
                      :..|:..|.:......|.:|: |:.|..|||. .||:..|.|||
Zfish   804 ----------SGVQLLQHTLEDPHYTLQKLK-LDFGGRSRII-PGLRKYAVDLT 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpaNP_001261138.1 F-box-like 149..190 CDD:289689 8/36 (22%)
AMN1 <226..>334 CDD:187754 24/118 (20%)
leucine-rich repeat 236..256 CDD:275381 4/19 (21%)
leucine-rich repeat 263..288 CDD:275381 7/30 (23%)
leucine-rich repeat 289..314 CDD:275381 3/24 (13%)
leucine-rich repeat 315..347 CDD:275381 10/36 (28%)
AMN1 347..524 CDD:187754 44/172 (26%)
leucine-rich repeat 348..373 CDD:275381 5/24 (21%)
leucine-rich repeat 374..398 CDD:275381 11/37 (30%)
leucine-rich repeat 399..424 CDD:275381 7/28 (25%)
leucine-rich repeat 425..450 CDD:275381 5/24 (21%)
leucine-rich repeat 451..475 CDD:275381 3/23 (13%)
leucine-rich repeat 476..501 CDD:275381 12/25 (48%)
si:ch73-236c18.7XP_021331546.1 COG5635 102..>606 CDD:227922 20/88 (23%)
FISNA 133..203 CDD:316956
NACHT 212..379 CDD:310381
LRR_RI <660..825 CDD:330982 46/209 (22%)
leucine-rich repeat 733..761 CDD:275378 6/27 (22%)
leucine-rich repeat 762..790 CDD:275378 7/28 (25%)
SPRY_PRY_SNTX 835..1012 CDD:294002 6/11 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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