DRSC/TRiP Functional Genomics Resources

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Protein Alignment RYBP and Rybp

DIOPT Version :9

Sequence 1:NP_001286742.1 Gene:RYBP / 37601 FlyBaseID:FBgn0034763 Length:150 Species:Drosophila melanogaster
Sequence 2:NP_001101349.1 Gene:Rybp / 312603 RGDID:1307077 Length:83 Species:Rattus norvegicus


Alignment Length:7 Identity:3/7 - (42%)
Similarity:6/7 - (85%) Gaps:0/7 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKKSSP 7
            ::|:.||
  Rat    72 VNKQGSP 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RYBPNP_001286742.1 zf-RanBP 20..43 CDD:279035
RanBP2-type Zn finger 23..42 CDD:275377
RybpNP_001101349.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11291
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4634
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003518
OrthoInspector 1 1.000 - - otm46103
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12920
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3403
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.060

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