DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30269 and CG42565

DIOPT Version :9

Sequence 1:NP_001303360.1 Gene:CG30269 / 37600 FlyBaseID:FBgn0050269 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_001286738.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster


Alignment Length:120 Identity:41/120 - (34%)
Similarity:55/120 - (45%) Gaps:13/120 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PPAPPSYDQATTTPAETTGPAPVPAST-------STTQH-TVVVVPGSPYGPEPMDVQCPYCHNY 86
            |||.....|...:||......||.|.|       |...| |.|:|..:..|     ..||:|:..
  Fly    21 PPAEDVMQQNLASPAHPNPVIPVMAQTMPVLQPVSVMHHQTTVLVDNTRQG-----TICPHCNAR 80

  Fly    87 ARTRVSFKPNSRTHLIALILCLFQLYCCVCLPYCISSCMNTNHYCGMCDRYLGTY 141
            .|.||...|...|:.:|.:||||..:.|||.|.|.:.|..|:.||..|:..||::
  Fly    81 IRLRVEHHPTGSTYCMAALLCLFLCWPCVCAPCCCNCCYKTSQYCPNCNSCLGSF 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30269NP_001303360.1 REC114-like <34..111 CDD:291822 26/84 (31%)
zf-LITAF-like 74..142 CDD:287559 25/68 (37%)
CG42565NP_001286738.1 zf-LITAF-like 72..135 CDD:287559 25/62 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X238
44.010

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