DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30269 and Cdip1

DIOPT Version :10

Sequence 1:NP_611704.2 Gene:CG30269 / 37600 FlyBaseID:FBgn0050269 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_001008361.1 Gene:Cdip1 / 360480 RGDID:1310686 Length:208 Species:Rattus norvegicus


Alignment Length:152 Identity:38/152 - (25%)
Similarity:55/152 - (36%) Gaps:29/152 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSVYPAAPLEAPKGSVELQATPEQQHLLPPAPPS--YDQATTTPAETTGPAP------VPASTST 58
            |..|..|....|.|               |.||.  |......|....||..      ||:..:|
  Rat    74 DGTYMPAGFYPPPG---------------PHPPMGYYPPGPYPPGSYPGPGGHTATVLVPSGAAT 123

  Fly    59 TQHTVVVVPGSPYGPEPMDVQCPYCHNYARTRVSFKPNSRTHLIALILCLF--QLYCCVCLPYCI 121
               ||.|:.|..:...|:...||:|.....|::|::......::....|..  .|.||: :|..|
  Rat   124 ---TVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCL-IPCLI 184

  Fly   122 SSCMNTNHYCGMCDRYLGTYDR 143
            :...:..|.|..|..|:.||.|
  Rat   185 NDFKDVTHTCPSCKAYICTYKR 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30269NP_611704.2 PTZ00144 <6..>63 CDD:240289 13/64 (20%)
zf-LITAF-like 73..142 CDD:463165 17/70 (24%)
Cdip1NP_001008361.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70
zf-LITAF-like 137..205 CDD:463165 17/68 (25%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 164..184 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

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