DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30269 and B0348.1

DIOPT Version :9

Sequence 1:NP_001303360.1 Gene:CG30269 / 37600 FlyBaseID:FBgn0050269 Length:144 Species:Drosophila melanogaster
Sequence 2:NP_503128.1 Gene:B0348.1 / 181935 WormBaseID:WBGene00015151 Length:87 Species:Caenorhabditis elegans


Alignment Length:83 Identity:26/83 - (31%)
Similarity:34/83 - (40%) Gaps:8/83 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 VVVPGSPYGP------EPMDVQCPYCHNYARTRVSFKPNSRTHLIALILCLFQLYCCVCLPYCIS 122
            :.||.:.|||      ||....||.|.....||:..: ......||..:..| |:..:|...|..
 Worm     1 MAVPITVYGPKMTEHYEPYSEYCPKCQCNHTTRMESR-RGNCWWIAFFIGFF-LFFPICYWLCCQ 63

  Fly   123 SCMNTNHYCGMCDRYLGT 140
            |..:|.|||..|...|.|
 Worm    64 SSKDTLHYCPSCGTLLAT 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30269NP_001303360.1 REC114-like <34..111 CDD:291822 15/52 (29%)
zf-LITAF-like 74..142 CDD:287559 21/67 (31%)
B0348.1NP_503128.1 LITAF 18..82 CDD:197841 20/66 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
22.060

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