DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and Cdip1

DIOPT Version :10

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001345008.1 Gene:Cdip1 / 66626 MGIID:1913876 Length:229 Species:Mus musculus


Alignment Length:140 Identity:39/140 - (27%)
Similarity:49/140 - (35%) Gaps:40/140 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PQAP-GFQAPPSYDSAPQQVYPQLHQGQG----------------VILQGENTENYESIGNNAPP 59
            |..| |:..|..|...|   ||    |.|                .:||||..|.          
Mouse   109 PHPPMGYYPPGPYPPGP---YP----GPGGHTATVLVPSGAATTVTVLQGEIFEG---------- 156

  Fly    60 NVLGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLG-GICCCCIPYCTDSCQSAKHTCT 123
                 .|....||.|.....||:.:|......:|....|.:| .:.||.||...:..:...|||.
Mouse   157 -----APVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCP 216

  Fly   124 SCGAYVGTYK 133
            ||.||:.|||
Mouse   217 SCKAYICTYK 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 22/67 (33%)
Cdip1NP_001345008.1 zf-LITAF-like 158..226 CDD:463165 22/67 (33%)

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