Protein Alignment CG4250 and Litaf

DIOPT Version :10

• Sequence 1: NP_001246468.1
• Gene: CG4250 / 37599
• FlyBaseID: FBgn0034761
• Length: 134
• Species: Drosophila melanogaster
• Sequence 2: NP_001099205.1
• Gene: Litaf / 65161
• RGDID: 69294
• Length: 161
• Species: Rattus norvegicus
• Alignment Length: 157
• Identity: 46/157 - (29%)
• Similarity: 64/157 - (40%)
• Gaps: 37/157 - (23%)

  Fly    14 APG-FQ----------APPSYDSA-------PQQVYPQLHQGQGVIL----QGENTENYES---- 52
            ||| :|          |||:|:..       |....||.....|:|.    :|.|..:|.:
  Rat     3 APGPYQAAAGPSVMPTAPPTYEETVGVNSYYPTPPAPQPGPATGLITGPDGKGMNPPSYYTQPVP 67

  Fly    53 IGN-NA---------PPNVLGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGIC-CC 106
            :.| ||         .|......|....||||.....|::.:.....|.|....:|:||.:. ||
  Rat    68 VPNANAIAVQTVYVQQPISFYDRPIQMCCPSCNKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCC 132

  Fly   107 CIPYCTDSCQSAKHTCTSCGAYVGTYK 133
            .||:|.|:.|...|.|.:|.|.:||||
  Rat   133 FIPFCVDALQDVDHYCPNCKALLGTYK 159

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4250	NP_001246468.1	zf-LITAF-like	66..133	CDD:463165	24/67 (36%)
Litaf	NP_001099205.1	PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732	20..23		2/2 (100%)
		zf-LITAF-like	89..159	CDD:463165	24/69 (35%)
		Membrane-binding amphipathic helix. /evidence=ECO:0000305	111..134		7/22 (32%)