DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and si:ch211-157c3.4

DIOPT Version :10

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001157840.1 Gene:si:ch211-157c3.4 / 561592 ZFINID:ZDB-GENE-030131-8454 Length:149 Species:Danio rerio


Alignment Length:91 Identity:28/91 - (30%)
Similarity:44/91 - (48%) Gaps:14/91 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LQGENTE------NYESIGNNAPPNVLGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICML 100
            :|.::||      :|||.       .||:.|::|||.||..:..|.|.::......|:.:||...
Zfish    53 VQSQSTEARNKYVSYESY-------ELGRKPAMATCTSCQQQVLTNVTYKVGVYAWLMCILIFFC 110

  Fly   101 GGIC-CCCIPYCTDSCQSAKHTCTSC 125
            |.:. ||.||:.....:.|.|:|..|
Zfish   111 GFVLGCCLIPFFMKFFKDAYHSCPRC 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 20/61 (33%)
si:ch211-157c3.4NP_001157840.1 zf-LITAF-like 74..142 CDD:463165 20/63 (32%)

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