DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4250 and si:ch211-202h22.8

DIOPT Version :9

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001278864.1 Gene:si:ch211-202h22.8 / 559550 ZFINID:ZDB-GENE-090313-78 Length:137 Species:Danio rerio


Alignment Length:157 Identity:41/157 - (26%)
Similarity:55/157 - (35%) Gaps:46/157 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEKNFQYENMQPQAPGFQAPPSYDS---------APQQVYPQLHQGQGVILQGENTENYESIGNN 56
            |||.       |..|.:..|....:         .||.|||. |...|.....:::.        
Zfish     1 MEKG-------PALPPYSGPEVNQTQFTPYPVQYQPQPVYPP-HPKDGFAPAVQSSP-------- 49

  Fly    57 AP---------PNVLGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGI------CCC 106
            ||         |..|...|....||.|    :.::..|......||..|||  ||:      .||
Zfish    50 APVVVTQVVMMPPSLSDVPGQTKCPHC----QQQIITETRYVNGLLTWLIC--GGLGILLIWPCC 108

  Fly   107 CIPYCTDSCQSAKHTCTSCGAYVGTYK 133
            .||:|..:|:..:|.|.:|...|..||
Zfish   109 LIPFCVSACKDVEHRCPNCKHVVFLYK 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:287559 22/72 (31%)
si:ch211-202h22.8NP_001278864.1 zf-LITAF-like 68..135 CDD:287559 22/72 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578962
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100529
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X238
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.840

Return to query results.
Submit another query.