DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and Gm5767

DIOPT Version :9

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:XP_030105031.1 Gene:Gm5767 / 436336 MGIID:3643507 Length:135 Species:Mus musculus


Alignment Length:119 Identity:35/119 - (29%)
Similarity:44/119 - (36%) Gaps:28/119 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QAPPSYDSAPQQVYPQLHQGQGVILQGENTENYESIGNNAPPNVLGQCPSV-------ATCPSCG 75
            :.|||       .||...:|.|       :.....:.|..||......|.:       |.||.||
Mouse    22 ETPPS-------SYPPSSRGPG-------SPGVYPVYNQVPPGPFTGIPYMPTSIPVQAVCPYCG 72

  Fly    76 VRRETKVEFEPSTKTHLL--ALLI--CMLGGICCCCIPYCTDSCQSAKHTCTSC 125
            .|..|...:.|...|.||  .|.:  |.||   ||.||:|..|.....|:|..|
Mouse    73 NRIMTVTTYTPGLLTWLLCSGLFVFGCFLG---CCLIPFCIRSTMDVTHSCPMC 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:287559 25/71 (35%)
Gm5767XP_030105031.1 zf-LITAF-like 63..131 CDD:371158 24/64 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1564782at2759
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X238
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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