DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and CG13516

DIOPT Version :10

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001033966.1 Gene:CG13516 / 3885599 FlyBaseID:FBgn0040658 Length:168 Species:Drosophila melanogaster


Alignment Length:155 Identity:45/155 - (29%)
Similarity:65/155 - (41%) Gaps:58/155 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PQAPG--FQAPPSYD-----------SAP-------------QQVYPQLHQGQGVILQGENTENY 50
            |.|.|  .:||||||           |||             :|..||                 
  Fly    31 PIANGLPIEAPPSYDVAVSVPVAPAVSAPAIAPARPPPVVVVEQPAPQ----------------- 78

  Fly    51 ESIGNNAPPNV-------LGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCCC- 107
                   ||.|       ||...|...||:||..:.|::....:::||::|.|:|::|..||.| 
  Fly    79 -------PPTVVPTDTLHLGPNRSRVLCPACGANKTTRMTHTANSRTHMVAGLLCLVGFCCCACF 136

  Fly   108 IPYCTDSCQSAKHTCTSCGAYVGTY 132
            :|||.:||::..|.|..|..::|.|
  Fly   137 VPYCMNSCRTGNHYCRKCNTFLGAY 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 25/68 (37%)
CG13516NP_001033966.1 zf-LITAF-like 92..162 CDD:463165 25/70 (36%)

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