DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and CG30196

DIOPT Version :9

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_726220.1 Gene:CG30196 / 37595 FlyBaseID:FBgn0050196 Length:147 Species:Drosophila melanogaster


Alignment Length:89 Identity:24/89 - (26%)
Similarity:36/89 - (40%) Gaps:13/89 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 ESIGNNAPPNVLGQCPSVA---------TCPSCGVRRETKVEFEPSTKTHLLALLICMLGGICCC 106
            ||:..:|....:...|.|.         .||:|...:.|.|:.|..|   :|..:.|.| .:..|
  Fly     5 ESLDGSAFEGDISSIPQVGHLTTEPQELECPACQQLQTTHVKSEAVT---VLQKIACSL-NVLLC 65

  Fly   107 CIPYCTDSCQSAKHTCTSCGAYVG 130
            |.|..........|.|:|||.::|
  Fly    66 CNPIRWKGRHDVNHYCSSCGCFIG 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:287559 21/74 (28%)
CG30196NP_726220.1 LITAF 29..90 CDD:197841 19/65 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23292
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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