DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and C08E8.1

DIOPT Version :9

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_507591.2 Gene:C08E8.1 / 182406 WormBaseID:WBGene00007437 Length:102 Species:Caenorhabditis elegans


Alignment Length:78 Identity:25/78 - (32%)
Similarity:34/78 - (43%) Gaps:17/78 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PNVLGQCP---SVAT-CPSCGVRRETKVEFEPSTKTHLLAL--LICMLGGICCCCIPY----CTD 113
            |.|:.:.|   |..| ||:|      :..:..|..||:...  |||..|.: .||.|:    |.|
 Worm    20 PYVVKETPLKTSFLTYCPTC------EKAYMTSVNTHIGVCWWLICFFGTV-LCCFPFLFFLCCD 77

  Fly   114 SCQSAKHTCTSCG 126
            ..:...|.|.|||
 Worm    78 VSKDVNHNCPSCG 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:287559 23/71 (32%)
C08E8.1NP_507591.2 LITAF 31..98 CDD:197841 22/67 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1564782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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