DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and LOC101730868

DIOPT Version :9

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:XP_004917999.1 Gene:LOC101730868 / 101730868 -ID:- Length:183 Species:Xenopus tropicalis


Alignment Length:181 Identity:43/181 - (23%)
Similarity:63/181 - (34%) Gaps:62/181 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PQAPGFQA-PPSYDSAPQQVYPQLHQGQ-----GVIL------------------QGENTENYES 52
            |...|:.| ||.|..:..:::|..|..|     |:.|                  .|.|.....:
 Frog     4 PYPQGYYASPPHYTQSAPELHPAPHYTQPIPQPGIPLVPQSNYPPPHAPENPKPTDGHNQNINIT 68

  Fly    53 IGN--------------------NAPP-------NVLG----QCPSVATCPSCGVRRETKVEFEP 86
            |.|                    ||.|       .::|    ..|..||||:|..|..|::::..
 Frog    69 IANPLTPTVPVANAQPLQSAPVVNAQPLQSAPVHTIVGSSFQDTPVTATCPNCNQRIITRLQYSV 133

  Fly    87 STKTHLLALLI----CMLGGICCCCIPYCTDSCQSAKHTCTSCGAYVGTYK 133
            ...:.:|..:.    |.||   ||.||:..|.|:...|.|.||...:..||
 Frog   134 GLFSWILFAVFMFFGCWLG---CCIIPFVMDRCKDVDHYCPSCNYLLHKYK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:287559 22/70 (31%)
LOC101730868XP_004917999.1 zf-LITAF-like 112..181 CDD:287559 22/71 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1564782at2759
OrthoFinder 1 1.000 - - FOG0000358
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X238
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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