DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4250 and si:ch211-202h22.7

DIOPT Version :10

Sequence 1:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster
Sequence 2:XP_068077985.2 Gene:si:ch211-202h22.7 / 100535203 ZFINID:ZDB-GENE-090313-77 Length:203 Species:Danio rerio


Alignment Length:153 Identity:45/153 - (29%)
Similarity:60/153 - (39%) Gaps:41/153 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MQPQAPGFQAPPSYDS--------------APQQVY-PQLHQGQGVILQGENTENYESIGNNAP- 58
            |.|..||..:|....|              ||..|| ||.......::|        ::...|| 
Zfish    61 MAPVYPGVVSPGMSTSTVTQTMQSTAMPGIAPMAVYNPQPAVMSSSVIQ--------TVQTAAPP 117

  Fly    59 ---------PNVLGQCPSVATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGIC----CCCIPY 110
                     |:.||:||....||.|    :.:|..|.:....||...||:..||.    ||.||:
Zfish   118 PAQTTVVLMPSRLGECPGQMRCPHC----QQQVVTETTYVNGLLVWGICIGLGIFGIWPCCLIPF 178

  Fly   111 CTDSCQSAKHTCTSCGAYVGTYK 133
            |.|||:..:|.|..|.:.|..||
Zfish   179 CVDSCKDVQHRCPGCKSLVYVYK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 24/70 (34%)
si:ch211-202h22.7XP_068077985.2 None

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