DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42565 and litaf

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001002184.1 Gene:litaf / 431731 ZFINID:ZDB-GENE-040704-23 Length:163 Species:Danio rerio


Alignment Length:142 Identity:39/142 - (27%)
Similarity:58/142 - (40%) Gaps:15/142 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VDSPPPYS-------DPFATAPPAEDVMQQNLASPAHP----NPVIPVMAQTMPVLQP---VSVM 57
            |..|||.|       :|:..|.|......:....|.:|    |.:.|..||..||..|   |..:
Zfish    17 VGHPPPPSYDEISGANPYYPAGPYPPADMKASGPPPYPTQEYNQMYPPTAQGQPVTSPVVAVQTV 81

  Fly    58 HHQTTVLVDNTRQGTICPHCNARIRLRVEHHPTGSTYCMAALLCLFLC-WPCVCAPCCCNCCYKT 121
            :.|..::..|......||.|:..:..|:|:......:...|.|.:|.| :.|...|.|.......
Zfish    82 YVQPGLVFGNVPVQAHCPVCSQSVITRLEYSSGPLVWLSCAGLAVFGCIYGCCLIPFCIEDLKDV 146

  Fly   122 SQYCPNCNSCLG 133
            :.:||||:|.||
Zfish   147 THHCPNCSSVLG 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 19/67 (28%)
litafNP_001002184.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 3/5 (60%)
PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 22..25 1/2 (50%)
zf-LITAF-like 93..161 CDD:463165 19/66 (29%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 116..136 5/19 (26%)

Return to query results.
Submit another query.