DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and CG4250

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster


Alignment Length:132 Identity:33/132 - (25%)
Similarity:56/132 - (42%) Gaps:26/132 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PFATAPPAEDVMQQNLASPAHPNPVIPVMAQTMPV-LQPVSVMHHQTTVLVDNTRQGTI------ 73
            |...|||:.|         :.|..|.|.:.|...| ||..:..::::   :.|.....:      
  Fly    15 PGFQAPPSYD---------SAPQQVYPQLHQGQGVILQGENTENYES---IGNNAPPNVLGQCPS 67

  Fly    74 ---CPHCNARIRLRVEHHPTGSTYCMAALLCLF--LCWPCVCAPCCCNCCYKTSQYCPNCNSCLG 133
               ||.|..|...:||..|:..|:.:|.|:|:.  :|  |.|.|.|.:.|......|.:|.:.:|
  Fly    68 VATCPSCGVRRETKVEFEPSTKTHLLALLICMLGGIC--CCCIPYCTDSCQSAKHTCTSCGAYVG 130

  Fly   134 SF 135
            ::
  Fly   131 TY 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 20/77 (26%)
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 20/69 (29%)

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