DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42565 and B0348.1

DIOPT Version :10

Sequence 1:NP_611702.1 Gene:CG42565 / 37598 FlyBaseID:FBgn0260767 Length:135 Species:Drosophila melanogaster
Sequence 2:NP_503128.1 Gene:B0348.1 / 181935 WormBaseID:WBGene00015151 Length:87 Species:Caenorhabditis elegans


Alignment Length:91 Identity:24/91 - (26%)
Similarity:37/91 - (40%) Gaps:10/91 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 MAQTMPVLQPVSVMHHQTTVLVDNTRQGTICPHCNARIRLRVEHHPTGSTYCMAALLCLFLCWPC 108
            ||..:.|..|....|::.        ....||.|......|:|.. .|:.:.:|..:..||.:| 
 Worm     1 MAVPITVYGPKMTEHYEP--------YSEYCPKCQCNHTTRMESR-RGNCWWIAFFIGFFLFFP- 55

  Fly   109 VCAPCCCNCCYKTSQYCPNCNSCLGS 134
            :|...||.....|..|||:|.:.|.:
 Worm    56 ICYWLCCQSSKDTLHYCPSCGTLLAT 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42565NP_611702.1 zf-LITAF-like 68..135 CDD:463165 19/67 (28%)
B0348.1NP_503128.1 LITAF 18..82 CDD:197841 19/74 (26%)

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