DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13511 and Litaf

DIOPT Version :10

Sequence 1:NP_611701.1 Gene:CG13511 / 37597 FlyBaseID:FBgn0034759 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_001099205.1 Gene:Litaf / 65161 RGDID:69294 Length:161 Species:Rattus norvegicus


Alignment Length:128 Identity:35/128 - (27%)
Similarity:59/128 - (46%) Gaps:23/128 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 APEPAD-TEMVT-----VTTQPNYGVVVTQ-IPVYTLNGVGPGA----HPLAVGCKPMRVRCPSC 62
            ||:|.. |.::|     ....|:|   .|| :||...|.:....    .|::...:|:::.||||
  Rat    38 APQPGPATGLITGPDGKGMNPPSY---YTQPVPVPNANAIAVQTVYVQQPISFYDRPIQMCCPSC 99

  Fly    63 RGEVTTSLATSPTRKT-----HMCALTLYICCCWPFICLPYFINYCKSVQHYCPNCGCHIGSY 120
            ...:.|.|:.:....|     .:|.|.....||:    :|:.::..:.|.||||||...:|:|
  Rat   100 NKMIVTQLSYNAGALTWLSCGSLCLLGCVAGCCF----IPFCVDALQDVDHYCPNCKALLGTY 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13511NP_611701.1 zf-LITAF-like 53..120 CDD:463165 21/71 (30%)
LitafNP_001099205.1 PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 20..23
zf-LITAF-like 89..159 CDD:463165 22/74 (30%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 111..134 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

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