DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13511 and Litaf

DIOPT Version :10

Sequence 1:NP_611701.1 Gene:CG13511 / 37597 FlyBaseID:FBgn0034759 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_064364.1 Gene:Litaf / 56722 MGIID:1929512 Length:161 Species:Mus musculus


Alignment Length:119 Identity:33/119 - (27%)
Similarity:53/119 - (44%) Gaps:20/119 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GRAPEPADTEMVTVTTQPNYGVVVTQIPVYTLNGVGPGAHPLAVGCKPMRVRCPSCRGEVTTSLA 71
            |..|....|:.|.|   ||...:..| .||.       ..|::...:|:::.||||...:.|.|:
Mouse    55 GMNPPSYYTQPVPV---PNANAIAVQ-TVYV-------QQPVSFYDRPVQMCCPSCSKMIVTQLS 108

  Fly    72 TSPTRKT-----HMCALTLYICCCWPFICLPYFINYCKSVQHYCPNCGCHIGSY 120
            .:....|     .:|.|.....||:    :|:.::..:.|.||||||...:|:|
Mouse   109 YNAGALTWLSCGSLCLLGCVAGCCF----IPFCVDALQDVDHYCPNCKALLGTY 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13511NP_611701.1 zf-LITAF-like 53..120 CDD:463165 21/71 (30%)
LitafNP_064364.1 PPxY motif 20..23
zf-LITAF-like 89..159 CDD:463165 22/74 (30%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 111..134 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

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