DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13511 and si:ch211-157c3.4

DIOPT Version :10

Sequence 1:NP_611701.1 Gene:CG13511 / 37597 FlyBaseID:FBgn0034759 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_001157840.1 Gene:si:ch211-157c3.4 / 561592 ZFINID:ZDB-GENE-030131-8454 Length:149 Species:Danio rerio


Alignment Length:85 Identity:21/85 - (24%)
Similarity:34/85 - (40%) Gaps:25/85 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 VGCKPMRVRCPSCRGEVTTSLATSPTRKTHMCALTLYICCCWPFIC--------LPYFINYCKSV 106
            :|.||....|.||:.:|.|::       |:...:..::.|...|.|        :|:|:.:.|..
Zfish    72 LGRKPAMATCTSCQQQVLTNV-------TYKVGVYAWLMCILIFFCGFVLGCCLIPFFMKFFKDA 129

  Fly   107 QHYCPNCG----------CH 116
            .|.||.|.          ||
Zfish   130 YHSCPRCNKILHVEKKRCCH 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13511NP_611701.1 zf-LITAF-like 53..120 CDD:463165 20/82 (24%)
si:ch211-157c3.4NP_001157840.1 zf-LITAF-like 74..142 CDD:463165 18/74 (24%)

Return to query results.
Submit another query.