DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13511 and litaf

DIOPT Version :10

Sequence 1:NP_611701.1 Gene:CG13511 / 37597 FlyBaseID:FBgn0034759 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_988970.1 Gene:litaf / 394567 XenbaseID:XB-GENE-1017030 Length:148 Species:Xenopus tropicalis


Alignment Length:73 Identity:25/73 - (34%)
Similarity:35/73 - (47%) Gaps:9/73 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 KPMRVRCPSCRGEVTTSLATSPTRKT-----HMCALTLYICCCWPFICLPYFINYCKSVQHYCPN 112
            :|:::.|.||...:||.|..|.....     .:|.|.....||    .:|:.|:..|.|.|||||
 Frog    77 RPVQMCCRSCNSMITTRLEYSSGALAWLSCGGLCLLGCIGGCC----LIPFCIDSLKDVDHYCPN 137

  Fly   113 CGCHIGSY 120
            |...:|||
 Frog   138 CHALLGSY 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13511NP_611701.1 zf-LITAF-like 53..120 CDD:463165 23/71 (32%)
litafNP_988970.1 PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 20..23
zf-LITAF-like 76..146 CDD:463165 25/73 (34%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 101..123 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.

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