DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13510 and CG4250

DIOPT Version :10

Sequence 1:NP_611700.2 Gene:CG13510 / 37596 FlyBaseID:FBgn0034758 Length:129 Species:Drosophila melanogaster
Sequence 2:NP_001246468.1 Gene:CG4250 / 37599 FlyBaseID:FBgn0034761 Length:134 Species:Drosophila melanogaster


Alignment Length:129 Identity:51/129 - (39%)
Similarity:65/129 - (50%) Gaps:20/129 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QTYQPGGP--TQPPLYPPMPQP-----PQSSTVIIQTTTTSNLVPIGSG---------PTRIRCP 67
            :..||..|  ..||.|...||.     .|...||:|...|.|...||:.         |:...||
  Fly     8 ENMQPQAPGFQAPPSYDSAPQQVYPQLHQGQGVILQGENTENYESIGNNAPPNVLGQCPSVATCP 72

  Fly    68 SCHAEVLTTVKSTPSGRTHCWALILCLF--ICWPCVCLPYCMDSCQNANHYCPNCSAYIGTYEN 129
            ||.....|.|:..||.:||..||::|:.  ||  |.|:|||.||||:|.|.|.:|.||:|||:|
  Fly    73 SCGVRRETKVEFEPSTKTHLLALLICMLGGIC--CCCIPYCTDSCQSAKHTCTSCGAYVGTYKN 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13510NP_611700.2 zf-LITAF-like 61..128 CDD:463165 33/68 (49%)
CG4250NP_001246468.1 zf-LITAF-like 66..133 CDD:463165 33/68 (49%)

Return to query results.
Submit another query.