DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13510 and LOC101730868

DIOPT Version :10

Sequence 1:NP_611700.2 Gene:CG13510 / 37596 FlyBaseID:FBgn0034758 Length:129 Species:Drosophila melanogaster
Sequence 2:XP_004917999.1 Gene:LOC101730868 / 101730868 XenbaseID:XB-GENE-29084887 Length:183 Species:Xenopus tropicalis


Alignment Length:152 Identity:43/152 - (28%)
Similarity:65/152 - (42%) Gaps:40/152 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PYSEQSGYTPAQTYQPGGPTQP----------------PLYPPMP----QPPQSSTVI----IQT 48
            |...||.|.|     |..|..|                ||.|.:|    ||.||:.|:    :|:
 Frog    39 PLVPQSNYPP-----PHAPENPKPTDGHNQNINITIANPLTPTVPVANAQPLQSAPVVNAQPLQS 98

  Fly    49 TTTSNLVPIGSG----PTRIRCPSCHAEVLTTVKSTPSGRTHCWAL--ILCLFICW-PCVCLPYC 106
            .....:|  ||.    |....||:|:..::|.::.  |.....|.|  :...|.|| .|..:|:.
 Frog    99 APVHTIV--GSSFQDTPVTATCPNCNQRIITRLQY--SVGLFSWILFAVFMFFGCWLGCCIIPFV 159

  Fly   107 MDSCQNANHYCPNCSAYIGTYE 128
            ||.|::.:||||:|:..:..|:
 Frog   160 MDRCKDVDHYCPSCNYLLHKYK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13510NP_611700.2 zf-LITAF-like 61..128 CDD:463165 21/69 (30%)
LOC101730868XP_004917999.1 PABP-1234 <1..101 CDD:130689 18/66 (27%)
zf-LITAF-like 111..181 CDD:463165 21/71 (30%)

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