DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6d2 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_611698.1 Gene:Cyp6d2 / 37594 FlyBaseID:FBgn0034756 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:556 Identity:126/556 - (22%)
Similarity:239/556 - (42%) Gaps:124/556 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILIAGLLYRYVKRHYTHWQRLGVDEEPAKIPFGVMDTVMKQERSLGMALADI------------Y 60
            |.:|  ::.|....:|.|:|.|| ..|...|.            ||:.|..:            :
 Worm    12 IFVA--VFSYYIWQWTFWRRRGV-VGPMGFPV------------LGVFLNSLDNNFPFPLQCREW 61

  Fly    61 ARHEGKIVGIYMLNKRSILIRDAQLARQIMTSDFASFHDR---GVYVDEDKDPLSANLFNLRGAS 122
            .:..|||.|......::::|.|.:|..::..:.:.:|:.|   .:..|.:|:. ..|||..:|..
 Worm    62 TKKFGKIYGFTEGTLKTLVISDPELVHEVFVTQYDNFYGRKRNPIQGDSEKEK-RTNLFAAQGFR 125

  Fly   123 WRNLRQKLTPSFSSGKIKGMFGTIDDVGDKLVQHLEGALDQSDEVEIKDVMTTYAVDIIGSVIFG 187
            |:.||...:|:||:..::.::.|::|...:|::|:|.......::::......:.:|:||.:..|
 Worm   126 WKRLRAISSPTFSNSSLRKLYQTVEDSALELLRHIEKQSAGGKQIDMLKFYQEFTLDVIGRIAMG 190

  Fly   188 LEIDS--FRNPKNEFREISSSTSRDESLLLKIHNMSMFICPPIAKLMN-------RLG--YESRI 241
             :.||  |:||                           |.|.::||..       .:|  :.:.:
 Worm   191 -QTDSQMFKNP---------------------------IMPIVSKLFQGNFAKLFLIGGIFPTFL 227

  Fly   242 LTSLRDMMKRTIE---FREEHNVVRKDMLQLLIRLR-----NTGKIGED--------DDQVWDME 290
            :..:|.::.:.::   || :.|.:..|.:...|:.|     |..:|||.        |.:..|:|
 Worm   228 VEIIRQILLKNLKVGSFR-KINEITLDAIHNRIKQREEDQKNGIEIGEPADFIDLFLDAKAEDVE 291

  Fly   291 TAQEQ-----------LKSMSIEKIAAQAFLFYVAGSESTAAASAFTLYELSMYPELLKEAQEEV 344
            ...|.           .:.::.|:|..|..:|.:||.::||.:.::..|.|:.:||:.|:.||||
 Worm   292 HFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSLSYATYLLATHPEIQKKLQEEV 356

  Fly   345 DAVLMKHNLKPKDRFTYEAVQDLKFLDICIMETIRKYPGLPFLN-RECTEDYPVPGTNHIIAKGT 408
            :...      |....|.:.:..||:::....|.:|.||...|.| |.|..:..:  .|..:..||
 Worm   357 NREC------PNPEVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRCMRNTKL--GNMKVEVGT 413

  Fly   409 PILISLFGMQRDP-VYFPNPNGYDPHRFDSNNMN--YDQAAYMPFGEGPRHCIALRMGKVNSKVA 470
            .|.:..:.:..|| ::..:...:.|.|:.:.|.:  |.::.|:|||.|||.||.:|:..:..|:.
 Worm   414 MIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGPRQCIGMRLAYMEEKIL 478

  Fly   471 VAKILANFDLVQSPRKEVEFRFDAAPVLVTKEPLKL 506
            :..||..|......:.|:              ||||
 Worm   479 LVHILRKFTFETGAKTEI--------------PLKL 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d2NP_611698.1 p450 65..506 CDD:278495 111/485 (23%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 113/489 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm4759
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.