DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6d2 and cyp-25A4

DIOPT Version :9

Sequence 1:NP_611698.1 Gene:Cyp6d2 / 37594 FlyBaseID:FBgn0034756 Length:512 Species:Drosophila melanogaster
Sequence 2:NP_497779.1 Gene:cyp-25A4 / 183248 WormBaseID:WBGene00007967 Length:501 Species:Caenorhabditis elegans


Alignment Length:530 Identity:127/530 - (23%)
Similarity:237/530 - (44%) Gaps:60/530 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILLTILIAGLLYRYVKRHYTHWQR--LGVDEEPAKIPFGVMDTVMKQERSLGMALADIYARHE- 64
            ||..|| |..:.|...:||.....|  :|:...|....:|.::.:..:...||  ..|....|. 
 Worm     8 TIFFTI-ITFISYSIWRRHAIFKLRSSIGIPGPPVHWLWGNLNIIKDRVSRLG--YNDTTQWHPT 69

  Fly    65 -----GKIVGIYMLNKRSILIRDAQLARQIMTSDFASFHDRGVYVDEDKDPLSANLF-NLRGASW 123
                 |.|.|:|...:..|.:.:.:..::|...:|::|.||........:.|:.:|. |.....|
 Worm    70 LHTKYGPIFGLYCGTQLHITVSEEEDIKEIFIQNFSNFSDRMTPDIFGMNQLNQSLLQNTYATGW 134

  Fly   124 RNLRQKLTPSFSSGKIKGMFGTIDDVGDKLVQHLEGALDQSDEVEIKDVMTTYAVDIIGSVIFGL 188
            ::.|..:.|.||:||:|.|..|:....|..::.|:.......:.:|.:...:.::||||...|.:
 Worm   135 KHTRSAIAPIFSTGKMKAMHETLVSKIDIFLEVLKEKSSSGQKWDIFENFQSLSLDIIGKCAFAI 199

  Fly   189 EIDSFRNPKNEF----REISSSTSRDESLLLKIHNMSMFICPPIAKLMNRLGYESRILTSLRDMM 249
            :.:..|:..:.|    |:...:....:|.:|           |::.::..|.:..|.|....|:.
 Worm   200 DSNCQRDRTDLFYVQARKFVGAVDLKKSWIL-----------PVSLILPELSWLWRFLYKFSDLS 253

  Fly   250 KRTIEFREEHNVVRKDMLQLLIRLRNTGKIGEDDDQVWDMETAQEQLKSMSIEKIAAQAFLFYVA 314
            ...:.       :.|.::.|..| |..|:.|.|...:.::...:|.:..|:..::....|.|.:|
 Worm   254 AAELP-------LVKGLVDLYDR-RRAGEGGNDSTDLLNLLIRRETIGKMTQREVIENCFAFLIA 310

  Fly   315 GSESTAAASAFTLYELSMYPELLKEAQEEVDAVLMKHNLKPKDR--FTYEAVQDLKFLDICIMET 377
            |.|:|:.|..|:.|.|:.||.:.::..||:.        |.|:.  ..|:::.::|:||....|:
 Worm   311 GYETTSTAMMFSAYLLAEYPIVQQKLYEEIK--------KTKENAGLNYDSIHNMKYLDCVYKES 367

  Fly   378 IRKYPGLP-FLNRECTEDYPVPGTNHIIAKGTPILISLFGMQRDPVYFPNPNGYDPHRFDSNNMN 441
            :|.||... |.||.|..|..:.|  .|..:.:.:.:..:.:.|:|..:.:|:.:.|.||::....
 Worm   368 LRFYPPTTHFTNRVCLNDMTIRG--QIYPEDSTLKVQPYTIHRNPANWESPDEFQPERFENWEEK 430

  Fly   442 YDQAAYMPFGEGPRHCIALRMGKVNSKVAVAKILANFDLVQSP--------RKEVEFRFDAAPVL 498
            .....::|||.|||:|:.:|..::..|..:||:|..|:|...|        ...|.|| ..:||.
 Worm   431 SSSLKWIPFGVGPRYCVGMRFAEMEFKTTIAKLLDTFELSLVPGDPPMIPETNGVIFR-PRSPVR 494

  Fly   499 VTKEPLKLRL 508
            :.   ||||:
 Worm   495 LN---LKLRI 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d2NP_611698.1 p450 65..506 CDD:278495 108/456 (24%)
cyp-25A4NP_497779.1 p450 37..489 CDD:278495 111/483 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm4722
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24292
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.920

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