DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30195 and Litaf

DIOPT Version :10

Sequence 1:NP_611696.2 Gene:CG30195 / 37592 FlyBaseID:FBgn0050195 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_064364.1 Gene:Litaf / 56722 MGIID:1929512 Length:161 Species:Mus musculus


Alignment Length:100 Identity:26/100 - (26%)
Similarity:38/100 - (38%) Gaps:26/100 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VDEPQIVAIIVSHKPQVGYLK------EEPTWIRCPSCEK-------------SGTSLVQLELVT 48
            |..|...||.|    |..|::      :.|..:.||||.|             :..|...|.|:.
Mouse    66 VPVPNANAIAV----QTVYVQQPVSFYDRPVQMCCPSCSKMIVTQLSYNAGALTWLSCGSLCLLG 126

  Fly    49 CLQRFLGFTKLCKKWSGRQDINHYCSHCGCFIGRF 83
            |:.... |...|.  ...||::|||.:|...:|.:
Mouse   127 CVAGCC-FIPFCV--DALQDVDHYCPNCKALLGTY 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30195NP_611696.2 zf-LITAF-like 26..85 CDD:470665 19/70 (27%)
LitafNP_064364.1 PPxY motif 20..23
zf-LITAF-like 89..159 CDD:463165 19/72 (26%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 111..134 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.

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