DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30195 and litaf

DIOPT Version :10

Sequence 1:NP_611696.2 Gene:CG30195 / 37592 FlyBaseID:FBgn0050195 Length:153 Species:Drosophila melanogaster
Sequence 2:NP_988970.1 Gene:litaf / 394567 XenbaseID:XB-GENE-1017030 Length:148 Species:Xenopus tropicalis


Alignment Length:99 Identity:22/99 - (22%)
Similarity:35/99 - (35%) Gaps:23/99 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PQIVAIIVSHKP---------QVGYLKEEPTWIRCPSCEKSGTSLVQLELVTCLQRFLGFTKLCK 61
            |.||..:....|         |...|.:.|..:.|.||....|:  :||..:....:|....||.
 Frog    49 PYIVQPVPMQPPVTVQTVYVQQAMTLYDRPVQMCCRSCNSMITT--RLEYSSGALAWLSCGGLCL 111

  Fly    62 KW------------SGRQDINHYCSHCGCFIGRF 83
            ..            ...:|::|||.:|...:|.:
 Frog   112 LGCIGGCCLIPFCIDSLKDVDHYCPNCHALLGSY 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30195NP_611696.2 zf-LITAF-like 26..85 CDD:470665 16/70 (23%)
litafNP_988970.1 PPxY motif. /evidence=ECO:0000250|UniProtKB:Q99732 20..23
zf-LITAF-like 76..146 CDD:463165 16/72 (22%)
Membrane-binding amphipathic helix. /evidence=ECO:0000305 101..123 3/21 (14%)
Blue background indicates that the domain is not in the aligned region.

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