DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2852 and cyn-13

DIOPT Version :10

Sequence 1:NP_611695.1 Gene:CG2852 / 37591 FlyBaseID:FBgn0034753 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001255925.1 Gene:cyn-13 / 178487 WormBaseID:WBGene00000889 Length:331 Species:Caenorhabditis elegans


Alignment Length:171 Identity:90/171 - (52%)
Similarity:115/171 - (67%) Gaps:1/171 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KVFFDITIGGEPAGRIEIGLFGKTVPKTVENFKELALKPQGEGYKGSKFHRIIKDFMIQGGDFTK 94
            :|:..:.||....|||.|.|.....|||.|||:.|....:|.||:||.|||||..||:|||||||
 Worm   140 RVYLGVKIGIRYIGRIVIELRTDVTPKTAENFRCLCTGERGFGYEGSIFHRIIPKFMLQGGDFTK 204

  Fly    95 GDGTGGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTKQTSWLDGRHVVFGKILS 159
            ||||||:||||.:|:||||.|:|...|.:||||.|.:||||||||.|::|.||||:|||||.::.
 Worm   205 GDGTGGKSIYGTKFDDENFTLRHTMPGTVSMANCGANTNGSQFFICTEKTDWLDGKHVVFGHVVE 269

  Fly   160 GMNVVRQIENSATDARDRPVKDVVIANSGTLPVSEAFSVAK 200
            |||:|||:|...|.: .:|...|.|..||.:...:..:..|
 Worm   270 GMNIVRQVEQQGTPS-GKPQMVVKIVESGEIEPEKRIAAEK 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2852NP_611695.1 cyclophilin 30..188 CDD:469651 87/157 (55%)
cyn-13NP_001255925.1 RRM_PPIE 13..87 CDD:409783
cyclophilin_ABH_like 139..297 CDD:238907 87/157 (55%)
Blue background indicates that the domain is not in the aligned region.

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